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  • State: published

Scophthalmus maximus – Alignment

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            1                                                                                    80
  AF338427                                                                                         
  AY164471                          ATGACCAG CCTACGAAAA TCCCACCCTA TCCTAAAGAT CGCAAATGAT GCTTTAGTAG
  AF413808  TTATTCAACT ATAGGAACCT TAATGACCAG CCTACGAAAA TCCCACCCTA TCCTAAAGAT CGCAAATGAT GCTTTAGTAG
  AF413807  TTATTCAACT ACAGGAACCT TAATGACCAG CCTACGAAAA TCCCACCCTA TCCTAAAGAT CGCAAATGAT GCTTTAGTAG
 Consensus  .......... .......... ..atgaccag cctacgaaaa tcccacccta tcctaaagat cgcaaatgat gctttagtag

            81                                                                                  160
  AF338427                                          CTT TGGCTCTCTT CTTGGCCTCT GCTTAGCCAC TCAACTCATT
  AY164471  ATCTCCCTGC CCCCTCTAAT ATCTCAGTTT GATGAAACTT TGGCTCTCTT CTTGGCCTCT GCTTAGCCAC TCAACTCATT
  AF413808  ATCTCCCTGC CCCCTCTAAT ATCTCAGTTT GATGAAACTT TGGCTCTCTT CTTGGCCTCT GCTTAGCCAC TCAACTCATT
  AF413807  ATCTCCCTGC CCCCTCTAAT ATCTCAGTTT GATGAAACTT TGGCTCTCTT CTTGGCCTCT GCTTAGCCAC TCAACTCATT
 Consensus  atctccctgc cccctctaat atctcagttt gatgaaaCTT TGGCTCTCTT CTTGGCCTCT GCTTAGCCAC TCAACTCATT

            161                                                                                 240
  AF338427  ACCGGACTCT TTTTAGCTAC GCACTATACC GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCATATCA CCCGAGACGT
  AY164471  ACCGGACTCT TTTTAGCTAT GCACTATACC GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCATATCA CCCGAGACGT
  AF413808  ACCGGACTCT TTTTAGCTAT GCACTATACC GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCATATCA CCCGAGACGT
  AF413807  ACCGGACTCT TTTTAGCTAT GCACTATACC GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCATATCA CCCGAGACGT
 Consensus  ACCGGACTCT TTTTAGCTAt GCACTATACC GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCATATCA CCCGAGACGT

            241                                                                                 320
  AF338427  TAATTACGGT TGATTAATCC GAAACCTACA CGCCAACGGC GCATCCTTCT TCTTCTTATG TATTTATGCA CATATCGGCC
  AY164471  TAATTACGGT TGATTAATCC GAAACCTACA CGCCAACGGC GCATCCTTCT TCTTCTTATG TATTTATGCA CATATCGGCC
  AF413808  TAATTACGGT TGATTGATCC GAAACCTACA CGCCAACGGC GCATCCTTCT TCTTCTTATG TATTTATGCA CATATCGGCC
  AF413807  TAATTACGGT TGATTAATCC GAAACCTACA CGCCAACGGC GCATCCTTCT TCTTCTTATG TATTTATGCA CATATCGGCC
 Consensus  TAATTACGGT TGATTaATCC GAAACCTACA CGCCAACGGC GCATCCTTCT TCTTCTTATG TATTTATGCA CATATCGGCC

            321                                                                                 400
  AF338427  GAGGTCTGTA CTACGGCTCT TACCTTTATA AAGAAACCTG AAACGTGGGA GTTATCCTTC TTCTTCTCGT TATAGCAACT
  AY164471  GAGGTCTGTA CTACGGCTCT TACCTTTATA AAGAAACCTG AAACGTGGGA GTTATCCTTC TTCTTCTCGT TATAGCAACT
  AF413808  GAGGTCTGTA CTACGGCTCT TACCTTTATA AAGAAACCTG AAACGTGGGA GTTATCCTTC TTCTTCTCGT TATAGCAACT
  AF413807  GAGGTCTGTA CTACGGCTCT TACCTTTATA AAGAAACCTG AAACGTGGGA GTTATCCTTC TTCTTCTCGT TATAGCAACT
 Consensus  GAGGTCTGTA CTACGGCTCT TACCTTTATA AAGAAACCTG AAACGTGGGA GTTATCCTTC TTCTTCTCGT TATAGCAACT

            401                                                450
  AF338427  GCCTTCGTCG GCTATGTTCT TCCC                            
  AY164471  GCCTTCGTCG GCTATGTTCT TCCCTGAGGA CAAATATCTT TCTGGGGCGC
  AF413808  GCCTTCGTCG GCTATGTTCT TCCC                            
  AF413807  GCCTTCGTCG GCTATGTTCT TCCC                            
 Consensus  GCCTTCGTCG GCTATGTTCT TCCC...... .......... ..........
Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890