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- State: published
Carassius carassius – Alignment
1 80 NC_006291 AAGAACCACC GTTGTTATTC AACTACAAGA ACCATTAATG GCAAGCCTAC GAAAAACACA CCCCCTCATT AAAATCGCTA AY714387 AAGAACCACC GTTGTTATTC AACTACAAGA ACCATTAATG GCAAGCCTAC GAAAAACACA CCCCCTCATT AAAATCGCTA Consensus AAGAACCACC GTTGTTATTC AACTACAAGA ACCATTAATG GCAAGCCTAC GAAAAACACA CCCCCTCATT AAAATCGCTA 81 160 NC_006291 ATGACGCACT AGTTGACCTA CCCACACCAT CCAACATTTC AGCATGATGA AACTTTGGCT CTCTACTAGG ATTATGCTTA AY714387 ATGACGCACT AGTTGACCTA CCCACACCAT CCAACATTTC AGCATGATGA AACTTTGGCT CTCTACTAGG ATTATGCTTA Consensus ATGACGCACT AGTTGACCTA CCCACACCAT CCAACATTTC AGCATGATGA AACTTTGGCT CTCTACTAGG ATTATGCTTA 161 240 NC_006291 ATTACTCAAA TTCTAACCGG CCTATTTCTA GCTATACATT ACACCTCAGA CATTTCAACC GCATTCTCAT CCGTTACCCA AY714387 ATTACTCAAA TTCTAACCGG CCTATTTCTA GCTATACATT ACACCTCAGA CATTTCAACC GCATTCTCAT CCGTTACCCA Consensus ATTACTCAAA TTCTAACCGG CCTATTTCTA GCTATACATT ACACCTCAGA CATTTCAACC GCATTCTCAT CCGTTACCCA 241 320 NC_006291 CATCTGCCGA GATGTAAACT ACGGCTGACT AATTCGTAAT ATTCACGCCA ATGGAGCATC ATTCTTCTTC ATCTGTATTT AY714387 CATCTGCCGA GATGTAAACT ACGGCTGACT AATTCGTAAT ATTCACGCCA ATGGAGCATC ATTCTTCTTC ATCTGTATTT Consensus CATCTGCCGA GATGTAAACT ACGGCTGACT AATTCGTAAT ATTCACGCCA ATGGAGCATC ATTCTTCTTC ATCTGTATTT 321 400 NC_006291 ACATACACAT TGCCCGAGGC CTATATTATG GATCATACCT TAACAAAGAA ACCTGAAACA TTGGAGTAGT TCTCCTACTC AY714387 ACATACACAT TGCCCGAGGC CTATATTATG GATCATACCT TAACAAAGAA ACCTGAAACA TTGGAGTAGT TCTCCTACTC Consensus ACATACACAT TGCCCGAGGC CTATATTATG GATCATACCT TAACAAAGAA ACCTGAAACA TTGGAGTAGT TCTCCTACTC 401 465 NC_006291 CTAGTTATAA TGACAGCCTT TGTCGGTTAT GTTCTTCCAT GAGGACAAAT GTCCTTTTGA GGCGC AY714387 CTAGTTATAA TGACAGCCTT TGTCGGTTAT GTTCTTCCAT GAGGACAAAT GTCCTTTTGA GGCGC Consensus CTAGTTATAA TGACAGCCTT TGTCGGTTAT GTTCTTCCAT GAGGACAAAT GTCCTTTTGA GGCGC
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890