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  • State: published

Zeus Faber – Alignment

 


            1                                                                                    80
 NC_003190  AAAAACCACC GTTATTATTT AACTACAAGA ACTTGTAATG GCCAGCCTAC GCAAAACACA CCCCCTACTA AAAATTGTAA
  AP002941  AAAAACCACC GTTATTATTT AACTACAAGA ACTTGTAATG GCCAGCCTAC GCAAAACACA CCCCCTACTA AAAATTGTAA
 Consensus  AAAAACCACC GTTATTATTT AACTACAAGA ACTTGTAATG GCCAGCCTAC GCAAAACACA CCCCCTACTA AAAATTGTAA

            81                                                                                  160
 NC_003190  ACGATGCACT AATTGACTTA CCAGCCCCCG CCAACATTTC AGTATGATGA AACTTTGGCT CTCTCCTAGG ACTATGCTTA
  AP002941  ACGATGCACT AATTGACTTA CCAGCCCCCG CCAACATTTC AGTATGATGA AACTTTGGCT CTCTCCTAGG ACTATGCTTA
 Consensus  ACGATGCACT AATTGACTTA CCAGCCCCCG CCAACATTTC AGTATGATGA AACTTTGGCT CTCTCCTAGG ACTATGCTTA

            161                                                                                 240
 NC_003190  CTAACCCAGA TTCTAACAGG ATTGTTTCTA GCAATACATT ATACATCTGA CATTGCTACC GCATTTTCCT CAGTCGCCCA
  AP002941  CTAACCCAGA TTCTAACAGG ATTGTTTCTA GCAATACATT ATACATCTGA CATTGCTACC GCATTTTCCT CAGTCGCCCA
 Consensus  CTAACCCAGA TTCTAACAGG ATTGTTTCTA GCAATACATT ATACATCTGA CATTGCTACC GCATTTTCCT CAGTCGCCCA

            241                                                                                 320
 NC_003190  CATCTGTCGA GACGTCAACT ACGGCTGATT AATCCGAAAT TTTCATGCTA ACGGAGCATC CTTTTTCTTT ATTTGCCTCT
  AP002941  CATCTGTCGA GACGTCAACT ACGGCTGATT AATCCGAAAT TTTCATGCTA ACGGAGCATC CTTTTTCTTT ATTTGCCTCT
 Consensus  CATCTGTCGA GACGTCAACT ACGGCTGATT AATCCGAAAT TTTCATGCTA ACGGAGCATC CTTTTTCTTT ATTTGCCTCT

            321                                                                                 400
 NC_003190  ACCTCCACAT CGGACGAGGA CTATATTATG GATCTTATTT ATATAAAGAG ACCTGAAACG TGGGAGTAGT ACTTTTCCTG
  AP002941  ACCTCCACAT CGGACGAGGA CTATATTATG GATCTTATTT ATATAAAGAG ACCTGAAACG TGGGAGTAGT ACTTTTCCTG
 Consensus  ACCTCCACAT CGGACGAGGA CTATATTATG GATCTTATTT ATATAAAGAG ACCTGAAACG TGGGAGTAGT ACTTTTCCTG

            401                                                                 465
 NC_003190  CTAGTAATAA TAACAGCTTT CGTTGGCTAT GTCTTACCAT GAGGACAAAT ATCTTTTTGA GGGGC
  AP002941  CTAGTAATAA TAACAGCTTT CGTTGGCTAT GTCTTACCAT GAGGACAAAT ATCTTTTTGA GGGGC
 Consensus  CTAGTAATAA TAACAGCTTT CGTTGGCTAT GTCTTACCAT GAGGACAAAT ATCTTTTTGA GGGGC

Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890