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Raja radiata – Alignment

Infos zum Verfahren

 


            1                                                                                    80
 NC_000893  AAAAACTACC GTTGTTATTC AACTACAAGA ACCTAATGAC CACAAATATT CGAAAAACCC ATCCATTATT TAAGATTATT
  AF106038  AAAAACTACC GTTGTTATTC AACTACAAGA ACCTAATGAC CACAAATATT CGAAAAACCC ATCCATTATT TAAGATTATT
 Consensus  AAAAACTACC GTTGTTATTC AACTACAAGA ACCTAATGAC CACAAATATT CGAAAAACCC ATCCATTATT TAAGATTATT

            81                                                                                  160
 NC_000893  AATAGCTCAC TTATTGACCT CCCCACCCCA GTCAACATCT CAATCTGATG AAATTATGGC TCACTTCTAG GACTTTGCCT
  AF106038  AATAGCTCAC TTATTGACCT CCCCACCCCA GTCAACATCT CAATCTGATG AAATTATGGC TCACTTCTAG GACTTTGCCT
 Consensus  AATAGCTCAC TTATTGACCT CCCCACCCCA GTCAACATCT CAATCTGATG AAATTATGGC TCACTTCTAG GACTTTGCCT

            161                                                                                 240
 NC_000893  GATTATTCAG ATCCTCACTG GCCTCTTCTT AGCCATGCAC TACACCCCAG ATATCGCCTC CGCTTTCTCC TCAGTTGTTC
  AF106038  GATTATTCAG ATCCTCACTG GCCTCTTCTT AGCCATGCAC TACACCCCAG ATATCGCCTC CGCTTTCTCC TCAGTTGTTC
 Consensus  GATTATTCAG ATCCTCACTG GCCTCTTCTT AGCCATGCAC TACACCCCAG ATATCGCCTC CGCTTTCTCC TCAGTTGTTC

            241                                                                                 320
 NC_000893  ACATCTGCCG AGATGTGAAT TATGGATGAC TTATCCGCAA TATTCACGCC AATGGAGCCT CACTCTTTTT TATCTGTATT
  AF106038  ACATCTGCCG AGATGTGAAT TATGGATGAC TTATCCGCAA TATTCACGCC AATGGAGCCT CACTCTTTTT TATCTGTATT
 Consensus  ACATCTGCCG AGATGTGAAT TATGGATGAC TTATCCGCAA TATTCACGCC AATGGAGCCT CACTCTTTTT TATCTGTATT

            321                                                                                 400
 NC_000893  TACATTCATA TAGCTCGTGG ATTCTACTAC GGATCTTACC TCAACAAAGA AACATGAAAT ATTGGGGTAA TCCTTTTATT
  AF106038  TACATTCATA TAGCTCGTGG ATTCTACTAC GGATCTTACC TCAACAAAGA AACATGAAAT ATTGGGGTAA TCCTTTTATT
 Consensus  TACATTCATA TAGCTCGTGG ATTCTACTAC GGATCTTACC TCAACAAAGA AACATGAAAT ATTGGGGTAA TCCTTTTATT

            401                                                                  466
 NC_000893  TTTATTAATA GCAACAGCCT TTGTAGGCTA TGTCTTGCCA TGGGGTCAAA TATCATTTTG AGGCGC
  AF106038  TTTATTAATA GCAACAGCCT TTGTAGGCTA TGTCTTGCCA TGGGGTCAAA TATCATTTTG AGGCGC
 Consensus  TTTATTAATA GCAACAGCCT TTGTAGGCTA TGTCTTGCCA TGGGGTCAAA TATCATTTTG AGGCGC
Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890