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- State: published
Chanos chanos – Alignment
1 80 L26056 AB054133 AAAAACCGCC GTTGTTATTC AACTACAAGA ACCCATAATG GCAAGCCTAC GAAAAACCCA CCCACTCATC AAAATTGCTA NC_004693 AAAAACCGCC GTTGTTATTC AACTACAAGA ACCCATAATG GCAAGCCTAC GAAAAACCCA CCCACTCATC AAAATTGCTA Consensus aaaaaccgcc gttgttattc aactacaaga acccataatg gcaagcctac gaaaaaccca cccactcatc aaaattgcta 81 160 L26056 AB054133 ATGACGCATT AGTCGACCTC CCAGCCCCAT CCAACATCTC AGTATGATGA AACTTTGGAT CCCTTCTAGG ACTCTGTTTA NC_004693 ATGACGCATT AGTCGACCTC CCAGCCCCAT CCAACATCTC AGTATGATGA AACTTTGGAT CCCTTCTAGG ACTCTGTTTA Consensus atgacgcatt agtcgacctc ccagccccat ccaacatctc agtatgatga aactttggat cccttctagg actctgttta 161 240 L26056 TTACAGG ACTATTCCTG GCCATGCACT ATACCTCTGA CATTTCAACA GCCTTCTCCT CCGTCACCCA AB054133 GCATCACAAA TCCTTACAGG ACTATTCCTG GCCATGCACT ATACCTCTGA CATTTCAACA GCCTTCTCCT CCGTCACCCA NC_004693 GCATCACAAA TCCTTACAGG ACTATTCCTG GCCATGCACT ATACCTCTGA CATTTCAACA GCCTTCTCCT CCGTCACCCA Consensus gcatcacaaa tccTTACAGG ACTATTCCTG GCCATGCACT ATACCTCTGA CATTTCAACA GCCTTCTCCT CCGTCACCCA 241 320 L26056 CATCTGCCGT GATGTCAGCT ACGGCTGACT CATCCGAAAC ATGCACGCCA ACGGAGCCTC ATTCTTC--- ATCTGCATCT AB054133 CATCTGCCGT GATGTCAGCT ACGGCTGACT CATCCGAAAC ATGCACGCCA ACGGAGCCTC ATTCTTCTTC ATCTGCATCT NC_004693 CATCTGCCGT GATGTCAGCT ACGGCTGACT CATCCGAAAC ATGCACGCCA ACGGAGCCTC ATTCTTCTTC ATCTGCATCT Consensus CATCTGCCGT GATGTCAGCT ACGGCTGACT CATCCGAAAC ATGCACGCCA ACGGAGCCTC ATTCTTCttc ATCTGCATCT 321 400 L26056 ACATGCACAC CCGCCGAGGC CTATACTACG GGTCCTACCT CTACAAAGAA ACATGAAACA TCGGAGTAGT CCTCCTCCTT AB054133 ACATGCACAC CGCCCGAGGC CTATACTACG GGTCCTACCT CTACAAAGAA ACATGAAACA TCGGAGTAGT CCTCCTCCTT NC_004693 ACATGCACAC CGCCCGAGGC CTATACTACG GGTCCTACCT CTACAAAGAA ACATGAAACA TCGGAGTAGT CCTCCTCCTT Consensus ACATGCACAC CgcCCGAGGC CTATACTACG GGTCCTACCT CTACAAAGAA ACATGAAACA TCGGAGTAGT CCTCCTCCTT 401 465 L26056 CTAGTAATAA AB054133 CTAGTAATAA TGACTGCTTT CGTCGGCTAT GTTCTCCCAT GAGGGCAAAT GTCATTCTGA GGAGC NC_004693 CTAGTAATAA TGACTGCTTT CGTCGGCTAT GTTCTCCCAT GAGGGCAAAT GTCATTCTGA GGAGC Consensus CTAGTAATAA tgactgcttt cgtcggctat gttctcccat gagggcaaat gtcattctga ggagc
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890