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Boreogadus saida – Alignment
1 80 AB091097 ATGGCCAGCC TTCGGAAAAC CCATCCAATC CTAAAAATTG CTAATAGTGC ATTAGTTGAT CTCCCCGCCC CCTCCAATAT AF081686 ATGGCCAGCC TTCGGAAAAC CCATCCAATC CTAAAAATTG CTAATAGTGC ATTAGTTGAT CTCCCCGCCC CCTCCAATAT Consensus ATGGCCAGCC TTCGGAAAAC CCATCCAATC CTAAAAATTG CTAATAGTGC ATTAGTTGAT CTCCCCGCCC CCTCCAATAT 81 160 AB091097 CTCAGTATGA TGAAATTTTG GCTCTCTTCT AGGCCTTTGC TTAATTACTC AGCTTTTAAC AGGATTATTT CTAGCCATAC AF081686 CTCAGTATGA TGAAATTTTG GCTCTCTTCT AGGCCTTTGC TTAATTACTC AGCTTTTAAC AGGATTATTT CTAGCCATAC Consensus CTCAGTATGA TGAAATTTTG GCTCTCTTCT AGGCCTTTGC TTAATTACTC AGCTTTTAAC AGGATTATTT CTAGCCATAC 161 240 AB091097 ACTACACCGC AGATATCGAA ACAGCCTTCT CATCCGTAGT CCACATCTGT CGTGATGTAA ATTATGGCTG ATTAATTCGA AF081686 ACTACACCGC AGATATCGAA ACAGCCTTCT CATCCGTAGT CCACATCTGT CGTGATGTAA ATTATGGCTG ATTAATTCGA Consensus ACTACACCGC AGATATCGAA ACAGCCTTCT CATCCGTAGT CCACATCTGT CGTGATGTAA ATTATGGCTG ATTAATTCGA 241 320 AB091097 AATATACATG CTAATGGTGC CTCTTTCTTT TTTATTTGTC TTTATATACA TATCGCCCGA GGTCTTTATT ACGGCTCTTA AF081686 AATATACATG CTAATGGTGC CTCTTTCTTT TTTATTTGTC TTTATATACA CATCGCCCGA GGTCTTTATT ACGGCTCTTA Consensus AATATACATG CTAATGGTGC CTCTTTCTTT TTTATTTGTC TTTATATACA cATCGCCCGA GGTCTTTATT ACGGCTCTTA 321 400 AB091097 TCTTTTTGTA GAGACATGAA GCATCGGAGT TGTCCTTTTT CTTCTAGTAA TAATAACCTC TTTCGTAGGT TACGTTCTTC AF081686 TCTTTTTGTA GAGACATGAA ACATCGGAGT TGTCCTTTTT CTTCTAGTAA TAATAACCTC TTTCGTAGGT TACGTTCTTC Consensus TCTTTTTGTA GAGACATGAA aCATCGGAGT TGTCCTTTTT CTTCTAGTAA TAATAACCTC TTTCGTAGGT TACGTTCTTC 401 428 AB091097 CCTGAGGACA AATATCGTTC TGAGGGGC AF081686 C Consensus C......... .......... ........
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890