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- State: published
Esox lucius – Alignment
1 80 NC_004593 AAAAACCACC GTTGTAAACT TCAACTATAA GAACTAATGA CCAGCCTTCG AAAAACCCAC CCCGTACTCA AAATTGTTAA AP004103 AAAAACCACC GTTGTAAACT TCAACTATAA GAACTAATGA CCAGCCTTCG AAAAACCCAC CCCGTACTCA AAATTGTTAA AF060439 TCAACTATAA GAACTAATGA CCAGCCTTCG AAAAACCCAC CCCGTACTCA AAATTGTTAA AY256445 CG AAAAACCCAC CCCGTACTCA AAATTGTTAA AY256446 CG AAAAACCCAC CCCGTACTCA AAATTGTTAA Consensus .......... .......... tcaactataa gaactaatga ccagccttCG AAAAACCCAC CCCGTACTCA AAATTGTTAA 81 160 NC_004593 CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA AP004103 CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA AF060439 CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA AY256445 CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA AY256446 CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA Consensus CGATGCACTA ATTGATCTCC CTGCCCCTGC AAACATTTCT ATCTGATGAA ACTTCGGCTC CCTCCTAGGG CTATGCTTGA 161 240 NC_004593 TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA TACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC AP004103 TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA TACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC AF060439 TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA CACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC AY256445 TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA TACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC AY256446 TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA CACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC Consensus TTACACAAAT CCTAACCGGC TTATTCCTAG CTATACATTA tACCTCTGAC ATCTCCACAG CCTTCTCATC AGTCTGCCAC 241 320 NC_004593 ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGTATTTA AP004103 ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGTATTTA AF060439 ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGCATTTA AY256445 ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGTATTTA AY256446 ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGCATTTA Consensus ATCTGCCGGG ACGTTAACTA CGGCTGACTT ATCCGAAATA TTCACGCTAA CGGTGCATCC TTATTCTTCA TCTGtATTTA 321 400 NC_004593 CATACACATC GCCCGAGGCC TTTATTATGG CTCCTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC AP004103 CATACACATC GCCCGAGGCC TTTATTATGG CTCCTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC AF060439 CATACACATC GCCCGAGGCC TTTATTATGG CTCTTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC AY256445 CATACACATC GCCCGAGGCC TTTATTATGG CTCTTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC AY256446 CATACACATC GCCCGAGGCC TTTATTATGG CTCTTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC Consensus CATACACATC GCCCGAGGCC TTTATTATGG CTCtTACTTA TACAAAGAAA CCTGAAATAT CGGAGTTATC CTCCTCCTCC 401 464 NC_004593 TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC AP004103 TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC AF060439 TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCT AY256445 TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC AY256446 TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC Consensus TAACAATAAT AACCGCCTTC GTTGGCTATG TTCTGCCCTg aggacaaata tctttttgag gcgc
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890