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Oncorhynchus kisutch – Alignment
1 80 AJ314563 AAAAAACCAC CGTTGTTATT CAACTACAAG AACCTAATGG CCAACCTCCG AAAAACCCAT CCTCTCCTAA AAATCGCTAA AF165079 CAAG AACCTAATGG CCAACCTCCG AAAAACCCAT CCTCTCCTAA AAATCGCTAA Consensus .......... .......... ......CAAG AACCTAATGG CCAACCTCCG AAAAACCCAT CCTCTCCTAA AAATCGCTAA 81 160 AJ314563 TGACGCACTA GTCGACCTCC CAGCACCCTC TAACATCTCA GTCTGATGAA ACTTTGGCTC ACTCCTAGGC CTATGTTTAG AF165079 TGACGCACTA GTCGACCTCC CAGCACCCTC TAACATCTCA GTCTGATGAA ACTTTGGCTC ACTCCTAGGC CTATGTTTAG Consensus TGACGCACTA GTCGACCTCC CAGCACCCTC TAACATCTCA GTCTGATGAA ACTTTGGCTC ACTCCTAGGC CTATGTTTAG 161 240 AJ314563 CCACCCAAAT TCTTACCGGG CTCTTCTTAG CCATGCACTA TACCTCCGAC ATTTCAACAG CTTTTTCCTC TGTCTGCCAT AF165079 CCACCCAAAT TCTTACCGGG CTCTTCTTAG CCATGCACTA TACCTCCGAC ATTTCAACAG CTTTTTCCTC TGTCTGCCAT Consensus CCACCCAAAT TCTTACCGGG CTCTTCTTAG CCATGCACTA TACCTCCGAC ATTTCAACAG CTTTTTCCTC TGTCTGCCAT 241 320 AJ314563 ATCTGCCGAG ATGTTAGTTA CGGCTGACTC ATTCGAAACA TCCACGCCAA CGGAGCATCT TTCTTTTTTA TTTGCATTTA AF165079 ATCTGCCGAG ATGTTAGTTA CGGCTGACTC ATTCGAAACA TCCACGCCAA CGGAGCATCT TTCTTTTTTA TTTGCATTTA Consensus ATCTGCCGAG ATGTTAGTTA CGGCTGACTC ATTCGAAACA TCCACGCCAA CGGAGCATCT TTCTTTTTTA TTTGCATTTA 321 400 AJ314563 TATACATATC GCCCGAGGAC TTTATTACGG CTCATACCTC TACAAAGAAA CCTGAAATAT CGGGGTGGTA CTTCTACTTC AF165079 TATACATATC GCCCGAGGAC TTTATTACGG CTCATACCTC TACAAAGAAA CCTGAAATAT CGGGGTGGTA CTTCTACTTC Consensus TATACATATC GCCCGAGGAC TTTATTACGG CTCATACCTC TACAAAGAAA CCTGAAATAT CGGGGTGGTA CTTCTACTTC 401 464 AJ314563 TCACTATAAT AACTGCCTTT GTGGGATACG TCCTCCCATG AGGACAAATA TCATTCTGGC GGA AF165079 TCACTATAAT AACTGCCTTT GTGGGATACG TCCTCCCATG AGGACAAATA TCCTTCTGAG GAGC Consensus TCACTATAAT AACTGCCTTT GTGGGATACG TCCTCCCATG AGGACAAATA TCaTTCTGac Gaa.
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890