Views
- State: published
Istiophorus platypterus – Alignment
1 80 AY319371 TCCTTACAGG CCTTTTCCTC GCTATGCACT ACACCTCAGA CATCGCAACA GCCTTCACAT CCGTAGCCCA TATCTGCCGA L11538 TCCTTACAGG CCTTTTCCTC GCTATGCACT ACACCTCAGA CATCGCAACA GCCTTCACAT CCGTAGCCCA YATCTGCCGR AY619698 GCTATGCACT ACACCTCAGA CATCGCAACA GCCTTCACAT CCGTAGCCCA CATCTGCCGG Consensus tccttacagg ccttttcctc GCTATGCACT ACACCTCAGA CATCGCAACA GCCTTCACAT CCGTAGCCCA .ATCTGCCG. 81 160 AY319371 GACGTGAATT ACGGCTGACT CATTCGAAAC ATACATGCCA ACGGCGCATC TTTCTTCTTT ATCTGCATTT ACCTCCATAT L11538 GACGTGAATT ACGGCTGACT CATTCGAAAT ATACATGCCA ACGGCGCATC TTTCTTCTTT ATCTGCATTT ACCTCCATAT AY619698 AACGTGAATT ACGGCTGACT CATTCGAAAT ATACATGCCA ACGGCGCATC TTTCTTCTAT ATCTGCATTT ACCTCCATAT Consensus gACGTGAATT ACGGCTGACT CATTCGAAAt ATACATGCCA ACGGCGCATC TTTCTTCTtT ATCTGCATTT ACCTCCATAT 161 240 AY319371 CGGCCGAGGC CTCTACTACG GCTCTTACCT ATATAAAGAA ACATGAAACG TGGGTGTCGT CCTCCTACTT CTAGTCATGA L11538 YGGCCGAGGC CTCTACTACG GCTCTTACCT ATATAAAGAA ACATGAAACG TGGGTGTCGT CCTCCTACTT CTAGTCATGA AY619698 CGGCCGAGGC CTCTACTACG GCTCTTACCT ATATAAAGAA ACATGAAACG TGGGTGTCGT CCTCCTACTT CTAGTCATGA Consensus cGGCCGAGGC CTCTACTACG GCTCTTACCT ATATAAAGAA ACATGAAACG TGGGTGTCGT CCTCCTACTT CTAGTCATGA 241 295 AY319371 TAACCGCCTT CGTCGGCTAT GTCCTCCCCT GAGGACAAAT GTCCTTCTGA GGTGC L11538 TAACCGCCTT CGTCGGCTAT GTCCTCCCCT GAGGACAAAT RTCCTTCTGA GGTGC AY619698 TAACCGCCTT CGTCGGCTAT GTCCTCCCCT GAGGACAAAT GTCCTTCTGA GGTGC Consensus TAACCGCCTT CGTCGGCTAT GTCCTCCCCT GAGGACAAAT gTCCTTCTGA GGTGC
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890