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- State: published
Lota lota – Alignment
1 80 AJ517496 ATGG CCAGCCTCCG AAAAACCCAC CCAATTCTAA AAATTGCTAA NC_004379 AAAAACCACC GTTGTAATTC AACTACAAAA ACCTTAATGG CCAGCCTCCG AAAAACCCAC CCAATTCTAA AAATTGCTAA AP004412 AAAAACCACC GTTGTAATTC AACTACAAAA ACCTTAATGG CCAGCCTCCG AAAAACCCAC CCAATTCTAA AAATTGCTAA Consensus aaaaaccacc gttgtaattc aactacaaaa accttaATGG CCAGCCTCCG AAAAACCCAC CCAATTCTAA AAATTGCTAA 81 160 AJ517496 TGACGCACTA GTAGACCTCC CCGCCCCTTC TAACATCTCA GTTTGATGAA ACTTTGGTTC TCTCCTAGGC CTTTGCTTAA NC_004379 TGACGCACTA GTAGACCTCC CCGCCCCTTC TAACATCTCA GTTTGATGAA ACTTTGGTTC TCTCCTAGGC CTTTGCTTAA AP004412 TGACGCACTA GTAGACCTCC CCGCCCCTTC TAACATCTCA GTTTGATGAA ACTTTGGTTC TCTCCTAGGC CTTTGCTTAA Consensus TGACGCACTA GTAGACCTCC CCGCCCCTTC TAACATCTCA GTTTGATGAA ACTTTGGTTC TCTCCTAGGC CTTTGCTTAA 161 240 AJ517496 TTACCCAGAT TTTAACAGGC CTATTCTTAG CCATACATTA CACCTCAGAC ATCGAAACAG CCTTTTCATC CGTTGTACAC NC_004379 TTACCCAGAT TTTAACAGGC CTATTCTTAG CCATACATTA CACCTCAGAC ATCGAAACAG CCTTTTCATC CGTTGTACAC AP004412 TTACCCAGAT TTTAACAGGC CTATTCTTAG CCATACATTA CACCTCAGAC ATCGAAACAG CCTTTTCATC CGTTGTACAC Consensus TTACCCAGAT TTTAACAGGC CTATTCTTAG CCATACATTA CACCTCAGAC ATCGAAACAG CCTTTTCATC CGTTGTACAC 241 320 AJ517496 ATCTGCCGTG ACGTAAACTA CGGATGACTA ATCCGAAATA TACACGCCAA CGGTGCCTCT TTTTTCTTTA TTTGCCTCTA NC_004379 ATCTGCCGTG ACGTAAACTA CGGATGACTA ATCCGAAATA TACACGCCAA CGGTGCCTCT TTTTTCTTTA TTTGCCTCTA AP004412 ATCTGCCGTG ACGTAAACTA CGGATGACTA ATCCGAAATA TACACGCCAA CGGTGCCTCT TTTTTCTTTA TTTGCCTCTA Consensus ATCTGCCGTG ACGTAAACTA CGGATGACTA ATCCGAAATA TACACGCCAA CGGTGCCTCT TTTTTCTTTA TTTGCCTCTA 321 400 AJ517496 TCTCCACATT GCCCGAGGCT TATATTACGG CTCATACCTA TTTATTGAAA CATGAAATAT TGGGGTTATT TTATTCCTGT NC_004379 TCTCCACATT GCCCGAGGCT TATATTACGG CTCATACCTA TTTATTGAAA CATGAAATAT TGGGGTTATT TTATTCCTGT AP004412 TCTCCACATT GCCCGAGGCT TATATTACGG CTCATACCTA TTTATTGAAA CATGAAATAT TGGGGTTATT TTATTCCTGT Consensus TCTCCACATT GCCCGAGGCT TATATTACGG CTCATACCTA TTTATTGAAA CATGAAATAT TGGGGTTATT TTATTCCTGT 401 464 AJ517496 TAGTAATAGT AACCTCTTTT G NC_004379 TAGTAATAGT AACCTCTTTT GTAGGCTATG TTCTTCCCTG AGGACAAATA TCCTTCTGAG GAGC AP004412 TAGTAATAGT AACCTCTTTT GTAGGCTATG TTCTTCCCTG AGGACAAATA TCCTTCTGAG GAGC Consensus TAGTAATAGT AACCTCTTTT Gtaggctatg ttcttccctg aggacaaata tccttctgag gagc
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890