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- State: published
Acipenser stellatus – Alignment
1 80 AJ585050 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAT NC_005795 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAT AJ249693 CAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283747 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283746 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283739 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283738 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283741 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF283740 TAAA AACCAATGGC AAACATCCGA AAAACACACC CACTACTTAA AATTATTAAC AF308879 AF308881 AF308886 AF308885 AF308883 AF308880 AF308884 AF404780 AF006131 Consensus .... .......... .......... .......... .......... .......... 81 160 AJ585050 GGAGCATTTA TTGATCTCCC CACACCCTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT NC_005795 GGAGCATTTA TTGATCTCCC CACACCCTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AJ249693 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283747 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283746 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283739 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283738 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283741 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF283740 GGAGCATTTA TTGACCTCCC CACGCCTTCC AACATCTCCG TGTGATGAAA TTTTGGCTCA CTCCTAGGCC TCTGCCTTAT AF308879 CTCCTAGGCC TCTGCCTTAT AF308881 CTCCTAGGCC TCTGCCTTAT AF308886 CTCCTAGGCC TCTGCCTTAT AF308885 CTCCTAGGCC TCTGCCTTAT AF308883 CTCCTAGGCC TCTGCCTTAT AF308880 CTCCTAGGCC TGTGCCTTAT AF308884 CTCCTAGGCC TNTGCCTTAT AF404780 CTCCTAGGCC TCTGCCTTAT AF006131 CTCCTAGGCC TCTGCCTTAT Consensus .......... .......... .......... .......... .......... .......... CTCCTAGGCC TcTGCCTTAT 161 240 AJ585050 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA NC_005795 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AJ249693 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283747 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283746 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283739 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283738 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283741 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF283740 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308879 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308881 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308886 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308885 CACACAAATC CTAACAGGAC TATTTCTCGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308883 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308880 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF308884 TACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF404780 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA AF006131 CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCT GTTGCCCACA Consensus CACACAAATC CTAACAGGAC TATTTCTTGC AATACACTAC ACAGCTGACA TTTCAACAGC CTTCTCCTCC GTCGCCCACA 241 320 AJ585050 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT NC_005795 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AJ249693 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283747 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283746 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283739 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283738 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283741 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF283740 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308879 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308881 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308886 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308885 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308883 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308880 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF308884 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF404780 TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT AF006131 TCTGCCGAGA TGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTCAT CTGCTTGTAT Consensus TCTGCCGAGA CGTGAATTAC GGATGACTAA TCCGAAATAT CCATGCAAAC GGGGCCTCCT TCTTCTTTAT CTGCTTGTAT 321 400 AJ585050 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT NC_005795 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AJ249693 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF283747 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF283746 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF283739 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF283738 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF283741 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTACTTCT AF283740 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTACTTCT AF308879 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF308881 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTACTTCT AF308886 CTTCACGTAG CACGAGGTAT ATACTACGGC TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF308885 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF308883 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTCCT AF308880 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF308884 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCC TCCTGCTTCT AF404780 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATC AF006131 CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAT Consensus CTTCACGTAG CACGAGGTAT ATACTACGGT TCATACCTCC AAAAAGAAAC CTGAAACATC GGAGTAATCc tcctgcttct 401 463 AJ585050 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCCTGA GGACAGATAT CATTTTGAGG GGC NC_005795 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCCTGA GGACAGATAT CATTTTGAGG GGC AJ249693 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCCTGA GGACAGATAT CATTTTGAGG GGC AF283747 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF283746 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF283739 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF283738 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF283741 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF283740 CACCATAATA ACCGCCTTCG TAGGATATGT GCTGCCC AF308879 CACCATAATA AF308881 CACCATAATA AF308886 CACCATAATA AF308885 CACCATAATA AF308883 CACCATAATA AF308880 CACCATAATA AF308884 AF404780 AF006131 Consensus caccataata .......... .......... .......
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890