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- State: published
Oncorhynchus gorbuscha – Alignment
1 80 AJ314562 AAAAACCACC GTTGTTATTC AACTACAAGA ACCTAATGGC CAACCTCCGA AAAACCCATC CTCTCCTAAA AATCGCTAAT AF165077 AAAAACCACC GTTGTTATTC AACTACAAGA ACCTAATGGC CAACCTCCGA AAAACCCATC CTCTCCTAAA AATCGCTAAT Consensus AAAAACCACC GTTGTTATTC AACTACAAGA ACCTAATGGC CAACCTCCGA AAAACCCATC CTCTCCTAAA AATCGCTAAT 81 160 AJ314562 GACGCACTAG TCGACCTCCC AGCACCATCT AACATCTCAG TCTGATGAAA CTTTGGCTCA CTCCTAGGCT TATGCCTAGC AF165077 GACGCACTAG TCGACCTCCC AGCACCATCT AACATCTCAG TCTGATGAAA CTTTGGCTCA CTCCTAGGCT TATGCCTAGC Consensus GACGCACTAG TCGACCTCCC AGCACCATCT AACATCTCAG TCTGATGAAA CTTTGGCTCA CTCCTAGGCT TATGCCTAGC 161 240 AJ314562 CACCCAAATT CTTACCGGGC TATTCCTAGC CATGCACTAC ACTTCCGACA TTTCAACAGC TTTTTCCTCT GTCTGCCACA AF165077 CACCCAAATT CTTACCGGGC TATTCCTAGC CATGCACTAC ACTTCCGACA TTTCAACAGC TTTTTCCTCT GTCTGCCACA Consensus CACCCAAATT CTTACCGGGC TATTCCTAGC CATGCACTAC ACTTCCGACA TTTCAACAGC TTTTTCCTCT GTCTGCCACA 241 320 AJ314562 TCTGCCGAGA TGTCAGCTAC GGCTGACTAA TTCGTAACAT CCATGCTAAC GGAGCATCTT TCTTTTTTAT TTGTATTTAT AF165077 TCTGCCGAGA TGTCAGCTAC GGCTGACTAA TTCGTAACAT CCATGCTAAC GGAGCATCTT TCTTTTTTAT TTGTATTTAT Consensus TCTGCCGAGA TGTCAGCTAC GGCTGACTAA TTCGTAACAT CCATGCTAAC GGAGCATCTT TCTTTTTTAT TTGTATTTAT 321 400 AJ314562 ATGCATATCG CCCGGGGACT TTATTATGGA TCATACCTAT ACAAAGAAAC CTGGAGTATC GGAGTTGTAC TTTTACTTCT AF165077 ATGCATATCG CCCGGGGACT TTATTATGGA TCATACCTAT ACAAAGAAAC CTGGAGTATC GGAGTTGTAC TTTTACTTCT Consensus ATGCATATCG CCCGGGGACT TTATTATGGA TCATACCTAT ACAAAGAAAC CTGGAGTATC GGAGTTGTAC TTTTACTTCT 401 463 AJ314562 CACTATAATA ACTGCATTCG TAGGCTACGT CCTCCCGTGA GGACAAATGT CATTCTGAGG GGC AF165077 CACTATAATA ACTGCATTCG TAGGCTACGT CCTCCCGTGA GGACAAATGT CCTTCTGAGG GGC Consensus CACTATAATA ACTGCATTCG TAGGCTACGT CCTCCCGTGA GGACAAATGT CaTTCTGAGG GGC
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890