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- State: published
Acipenser sturio – Alignment
1 80 AJ245839 CAA TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTCATTGACC TCCCCACACC AJ428497 CAA TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTCATTGACC TCCCCACACC AF283742 TAAAAACCAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTCATTGACC TCCCCACACC AF217209 A TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTCATTGACC TCCCCACACC AF006134 Consensus .........a tggcaaacat ccg.aaaaca cacccactac ttaaaattat taatggagca ttcattgacc tccccacacc 81 160 AJ245839 CTCCAACATC TCCGTGTGAT GAAACTTTGG CTCACTCCTA GGCCTCTGCC TTGTGACACA AATCTTAACA GGACTATTTC AJ428497 CTCCAACATC TCCGTGTGAT GAAACTTTGG CTCACTCCTA GGCCTCTGCC TTGTGACACA AATCTTAACA GGACTATTTC AF283742 CTCCAACATC TCCGTGTGAT GAAACTTTGG CTCACTCCTA GGCCTCTGCC TTGTGACACA AATCTTAACA GGACTATTTC AF217209 CTCCAACATC TCCGTGTGAT GAAACTTTGG CTCACTCCTA GGCCTCTGCC TTGTGACACA AATCTTAACA GGACTATTTC AF006134 CTCCTA GGCCTCTGCC TTGTTACACA AATCTTAACA GGACTATTTC Consensus ctccaacatc tccgtgtgat gaaactttgg ctcaCTCCTA GGCCTCTGCC TTGTgACACA AATCTTAACA GGACTATTTC 161 240 AJ245839 TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AJ428497 TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF283742 TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF217209 TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF006134 TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA Consensus TTGCAATACA TTACACAGCC GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA 241 320 AJ245839 CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA AJ428497 CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA AF283742 CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA AF217209 CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA AF006134 CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA Consensus CTAATCCGAA ATATTCATGC AAACGGGGCC TCTTTCTTCT TCATTTGCTT GTACCTTCAC GTAGCACGAG GCATATACTA 321 400 AJ245839 CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG ATCCTTCTGC TCCTCACCAT AATAACCGCC TTCGTGGGGT AJ428497 CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG ATCCTTCTGC TCCTCACCAT AATAACCGCC TTCGTGGGGT AF283742 CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG ATCCTTCTGC TCCTCACCAT AATAACCGCC TTCGTGGGGT AF217209 CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG ATCCTTCTGC TCCTCACCAT AATAACCGCC TTCGTGGGGT AF006134 CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG T Consensus CGGCTCATAC CTCCAAAAAG AAACCTGAAA CATCGGGGTG atccttctgc tcctcaccat aataaccgcc ttcgtggggt 401 437 AJ245839 ATGTATTACC CTGAGGACAA ATATCATTTT GAGGGGC AJ428497 ATGTATTACC CTGAGGACAA ATATCATTTT GAGGGGC AF283742 ATGTATTACC C AF217209 ATGTATTACC C AF006134 Consensus atgtattacc c......... .......... .......
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890