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- State: published
Acipenser ruthenus – Alignment
1 80 AJ249694 CAA TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF283733 TAAAAACCAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC X95055 AF308927 AF308926 AF308924 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 81 160 AJ249694 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCGCTCTTG GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF283733 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC X95055 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308927 CTCTTG GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308926 CTCTTG GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308924 CTCCTG GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC Consensus .......... .......... .......... ....CTCcTg GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC 161 240 AJ249694 TCGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF283733 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA X95055 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCCGTCGCC CACATCTGCC GAGACGTGAA TTACGGATGA AF308927 TCGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF308926 TCGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA AF308924 TCGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGATGA Consensus TcGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCtGTcGCC CACATCTGCC GAGAtGTaAA TTACGGATGA 241 320 AJ249694 TTAATCCGCA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTATCTCCAC GTAGCACGAG GCATGTACTA AF283733 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA X95055 CTAATCCGAA ATATTCACGC AAACGGGGCC TCCTTCTTCT TCATCTGCTT ATACCTTCAC GTAGCACGAG GTATGTACTA AF308927 TTAATCCGCA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTATCTCCAC GTAGCACGAG GCATGTACTA AF308926 TTAATCCGCA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTATCTCCAC GTAGCGCGAG GCATGTACTA AF308924 TTAATCCGCA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTATCTCCAC GTAGCACGAG GCATGTACTA Consensus tTAATCCGcA ATATTCAtGC AAACGGGGCC TCCTTCTTCT TtATCTGCTT gTAtCTcCAC GTAGCaCGAG GcATgTACTA 321 400 AJ249694 CGGTTCTTAT CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TCCTCACCAT AATAACCGCC TTCGTAGGAT AF283733 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT X95055 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AF308927 CGGTTCTTAT CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TCCT AF308926 CGGTTCTTAT CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TCCT AF308924 CGGTTCTTAT CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TCCT Consensus cGGTTCtTAt CTCCAAAAAG AAACCTGAAA cATCGGAGTA ATCCTCCTGC TcCT...... .......... .......... 401 437 AJ249694 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGAGC AF283733 ATGTACTGCC C X95055 AF308927 AF308926 AF308924 Consensus .......... .......... .......... .......
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890