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Acipenser naccarii – Alignment
1 80 AJ245834 CAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AJ245833 CAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF283730 TAAAAACCAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF217208 A TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF238660 AF238659 AF404783 AF006150 Consensus ... .......... .......... .......... .......... .......... .......... .......... 81 160 AJ245834 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AJ245833 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF283730 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF217208 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF238660 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF238659 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF404783 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF006150 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC Consensus .......... .......... .......... ....CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC 161 240 AJ245834 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AJ245833 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF283730 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF217208 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF238660 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF238659 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF404783 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF006150 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA Consensus TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTTGCC CACATCTGCC GAGACGTAAA TTACGGATGA 241 320 AJ245834 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AJ245833 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF283730 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF217208 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF238660 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF238659 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF404783 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATATACTA AF006150 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGGG GTATATACTA Consensus CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGaG GTATATACTA 321 400 AJ245834 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AJ245833 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF283730 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF217208 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF238660 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF238659 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF404783 TGGTTCATAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA ATC AF006150 TGGTTCGTAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA T Consensus TGGTTCaTAC CTCCAAAAAG AAACCTGAAA TATTGGAGTA atcctcctgc ttctcaccat aataaccgcc ttcgtgggat 401 437 AJ245834 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AJ245833 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AF283730 ATGTACTGCC C AF217208 ATGTACTGCC C AF238660 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AF238659 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AF404783 AF006150 Consensus atgtactgcc c......... .......... .......
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890