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- State: published
Acipenser baerii – Alignment
1 80 AF308892 AF308891 AF308887 X95054 AJ245825 CAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF283727 TAAAAACCAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF283728 TAAAAAMCAA TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF217206 A TGGCAAACAT CCGGAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC AF217207 AF238654 AF308889 AF308888 AF308890 AF006123 Consensus . .......... .......... .......... .......... .......... .......... .......... 81 160 AF308892 CTCCTA GGCCTGTGCC TTATCACACA AATCCTAACA GGACTATTTC AF308891 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308887 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC X95054 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AJ245825 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF283727 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF283728 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGAYTATTTC AF217206 CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF217207 TTTTGG CTCACTCATA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF238654 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308889 CTTCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308888 CTCCTA GGCTTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF308890 CTCCTA GGCCTGTGCC TTGTCACACA AATCCTAACA GGACTATTTC AF006123 CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC Consensus .......... .......... .......... ....CTCCTA GGCCTcTGCC TTGTCACACA AATCCTAACA GGACTATTTC 161 240 AF308892 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF308891 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF308887 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA X95054 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AJ245825 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF283727 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF283728 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF217206 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF217207 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF238654 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF308889 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF308888 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF308890 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA AF006123 TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA Consensus TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGACGTAAA TTACGGATGA 241 320 AF308892 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF308891 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF308887 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA X95054 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AJ245825 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF283727 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF283728 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF217206 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF217207 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF238654 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF308889 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF308888 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF308890 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA AF006123 CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA Consensus CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTTCAC GTAGCACGAG GTATGTACTA 321 400 AF308892 TGGNTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTNCTGC TTCTCACCAT AATA AF308891 TGGTTCATAC CTACAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AF308887 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA X95054 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AJ245825 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF283727 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF283728 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF217206 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF217207 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF238654 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTGGGAT AF308889 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AF308888 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AF308890 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA AF006123 TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA T Consensus TGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA atcctcctgc ttctcaccat aata...... .......... 401 437 AF308892 AF308891 AF308887 X95054 AJ245825 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AF283727 ATGTACTGCC C AF283728 ATGTACTGCC C AF217206 ATGTACTGCC C AF217207 ATGTACTGCC C AF238654 ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC AF308889 AF308888 AF308890 AF006123 Consensus .......... .......... .......... .......
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890