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- State: published
Abramis Brama – Alignment
1 80 Y09467 Y10441 ATGGCAAGCC TACGAAAAAC CCACCCACTA ATAAAAATCG CTAATGACGC ACTAGTCGAC CTCCCAACAC CATCTAACAT AJ555548 ACCCACTA ATAAAAATCG CTAATGACGC ACTAGTCGAC CTCCCAACAC CATCTAACAT AJ388438 AF238082 AC CATCTAACAT AY028981 AF486629 AY028980 AY028979 Consensus .. .......... 81 160 Y09467 CTCCT AGGATTATGT TTAATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC Y10441 TTCAACACTA TGAAACTTCG GATCCCTCCT AGGATTATGT TTAATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AJ555548 TTCAACACTA TGAAACTTCG GATCCCTCCT AGGATTATGT TTAATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AJ388438 AACTTCG GATCCCTCCT AGGATTATGT TTAATTACCC AAATCCTCAC GGGATTATTT CTACCCATAC AF238082 TTCAACACTA TGAAACTTCG GATCCCTCCT AGGAATATGT TTGATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AY028981 G GATCCCTCCT AGGATTATGT CTGATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AF486629 G GATCCCTCCT AGGATTATGT TTGATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AY028980 G GATCTCTCCT AGGAATGTGT CTGATTACCC AAATCCTCAC GGGATTATTT CTAGCCATAC AY028979 G GATCCCTCCT AGGAATATGT CTCATCACCC AAATCCTCAC GGGATTATTT CTAGCCATAC Consensus .......... .........G GATCcCTCCT AGGAtTaTGT tTgATtACCC AAATCCTCAC GGGATTATTT CTAGCCATAC 161 240 Y09467 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGACGTTA ACTACGGCTG ACTTATTCGA Y10441 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGACGTTA ACTACGGCTG ACTTATTCGA AJ555548 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGACGTTA ACTACGGCTG ACTTATTCGA AJ388438 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAAACTTTA ACTACGGTTG ACTTATTCAA AF238082 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGACGT AY028981 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGAC AF486629 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGAC AY028980 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGAC AY028979 ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGAC Consensus ACTACACCTC TGATATCTCC ACCGCATTTT CATCAGTAAC CCACATCTGC CGAGAC.... .......... .......... 241 320 Y09467 AACTTACATG CTAATGGAGC ATCATTCTTC TTTATCTGCC TTTATATACA TATTGCACGA GGCCTATACT ACGGGTCATA Y10441 AACTTACATG CTAATGGAGC ATCATTCTTC TTTATCTGCC TTTATATACA TATTGCACGA GGCCTATACT ATGGGTCATA AJ555548 AACTTACATG CTAATGGAGC ATCATTCTTC TTTATCTGCC TTTATATACA TATTGCACGA GGCCTATACT ATGGGTCATA AJ388438 AACTTACATG CTAATGGACC ATCATTCTTC TTTATCTGCC TTTATATACA TATTGCACAA GGCCTATACT ACGGGTCATA AF238082 AY028981 AF486629 AY028980 AY028979 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 321 400 Y09467 TCTTTACAAA GAAACCTGAA ATATTGGGGT GGCCCTATTT CTTCTAGTTA TAATAACAGC CTTCGTCGGC TACGTACTTC Y10441 TCTTTACAAA GAAACCTGAA ATATTGGCGT AGTCCTATTT CTTCTAGTTA TAATAACAGC CTTCGTCGGC TACGTACTTC AJ555548 TCTTTACAAA GAAACCTGAA ATATTGGCGT AGTCCTATTT CTTCTAGTTA TAATAACAGC CTTCGTCGGC TACGTACTTC AJ388438 TCTTTACAAA AAAACCTGAA ATATTGGCGT ATTCCTATTT CTTCTATTTA TAATAACAGC CTTCGTCGGT TACTTACTTC AF238082 AY028981 AF486629 AY028980 AY028979 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 401 428 Y09467 CATGA Y10441 CATGAGGACA AATGTCCTTT TGAGGTGC AJ555548 CATGAGGACA AATGTCCTTT TGAGGTGC AJ388438 CATTAGGACA AATATCATTC TAA AF238082 AY028981 AF486629 AY028980 AY028979 Consensus .......... .......... ...
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890