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Sebastes alutus – Alignment
1 80 AB096111 TC TACGAAAGAC ACACCCTCTC CTCAAAATCG CAAACAATGC CCTAGTTGAC CTACCCGCCC CCTCAAATAT AF030713 ATGGCAAGTC TACGAAAGAC ACACCCTCTC CTCAAAATCG CAAACAATGC CCTAGTTGAC CTACCCGCCC CCTCAAATAT Consensus ........TC TACGAAAGAC ACACCCTCTC CTCAAAATCG CAAACAATGC CCTAGTTGAC CTACCCGCCC CCTCAAATAT 81 160 AB096111 TTCAGTGTGA TGAAACTTCG GCTCTCTCTT AGGACTCTGC TTGATTATTC AAATCCTTAC AGGACTATTT TTAGCCATGC AF030713 TTCAGTGTGA TGAAACTTCG GCTCTCTCTT AGGACTCTGC TTGATTATTC AAATCCTTAC AGGACTATTT TTAGCCATGC Consensus TTCAGTGTGA TGAAACTTCG GCTCTCTCTT AGGACTCTGC TTGATTATTC AAATCCTTAC AGGACTATTT TTAGCCATGC 161 240 AB096111 ACTACACCTC TGATATTGCT ACGGCTTTTT CTTCCGTTGC TCATATTTGC CGAGACGTAA ATTACGGGTG ATTCATCCGA AF030713 ACTACACCTC TGATATTGCT ACGGCTTTTT CTTCCGTTGC TCATATTTGC CGAGACGTAA ATTACGGGTG ATTCATCCGA Consensus ACTACACCTC TGATATTGCT ACGGCTTTTT CTTCCGTTGC TCATATTTGC CGAGACGTAA ATTACGGGTG ATTCATCCGA 241 320 AB096111 AACCTTCACG CCAACGGTGC ATCCTTCTTC TTTGTATGCA TCTATGCCCA CATTGGCCGC GGACTTTACT ACGGCTCATA AF030713 AACCTTCACG CCAACGGTGC ATCCTTCTTC TTTGTATGCA TCTATGCCCA CATTGGCCGC GGACTTTACT ACGGCTCATA Consensus AACCTTCACG CCAACGGTGC ATCCTTCTTC TTTGTATGCA TCTATGCCCA CATTGGCCGC GGACTTTACT ACGGCTCATA 321 400 AB096111 CCTCTATAAA GAAACATGAA ACATCGGAGT AGTTCTTCTA CTTCTAGTTA TAATAACTGC TTTCGTCGGT TATGTATTAC AF030713 CCTCTATAAA GAAACATGAA ACATCGGAGT AGTTCTTCTA CTTCTAGTTA TAATAACTGC TTTCGTCGGT TATGTATTAC Consensus CCTCTATAAA GAAACATGAA ACATCGGAGT AGTTCTTCTA CTTCTAGTTA TAATAACTGC TTTCGTCGGT TATGTATTAC 401 428 AB096111 CCTGAGGCCA AATGTCCTTT TGAGGTGC AF030713 CCTGAGGCCA AATGTCCTTT TGAGGTGC Consensus CCTGAGGCCA AATGTCCTTT TGAGGTGC
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890