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  • State: published

Thunnus tongoll – Alignment

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            1                                                                                    80
  AB098115  TCACCGCTAC TAAAAATCGC TAATGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATT TCTGCATGAT GAAACTTTGG
  AF239964             TAAAAATCGC TAATGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATT TCTGCATGAT GAAACTTTGG
  AB098116             TAAAAATCGC TAACGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATC TCTGCATGAT GAAACTTTGG
    D63493                                                                                       GG
 Consensus  .......... taaaaatcgc taa.gacgca ctagttgacc ttcctacccc ctctaatat. tctgcatgat gaaactttGG

            81                                                                                  160
  AB098115  CTCACTACTT GGCCTTTGCC TTATCTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT
  AF239964  CTCACTACTT GGCCTTTGCC TTATCTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT
  AB098116  CTCACTACTT GGCCTTTGCC TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT
    D63493  CTCACTACTT GGCCTTTGCC TTATTTCTCA GATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT
 Consensus  CTCACTACTT GGCCTTTGCC TTATtTCTCA aATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT

            161                                                                                 240
  AB098115  CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC
  AF239964  CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC
  AB098116  CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC
    D63493  CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC
 Consensus  CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC

            241                                                                                 320
  AB098115  TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAT CTATACAAAG AAACATGAAA
  AF239964  TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAT CTATACAAAG AAACATGAAA
  AB098116  TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAC CTATACAAAG AGACATGAAA
    D63493  TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAC CTATACAAAG AAACATGAAA
 Consensus  TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAc CTATACAAAG AaACATGAAA

            321                                                                                 400
  AB098115  CATCGGAGTA GTACTCCTTC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGGGGAAAA ATGTCTTTCT
  AF239964  CATCGGAGTA GTACTCCTTC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGGGGACAA ATGTCTTTCT
  AB098116  CATCGGAGTA GTACTCCTGC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGGGGACAA ATGTCTTTCT
    D63493  CATCGGAGTA GTACTCCTTC TCCTAGTTAT GATGACCGCC TTCGTTGGCT                                 
 Consensus  CATCGGAGTA GTACTCCTtC TCCTAGTTAT GATGACCGCC TTCGTTGGCT acgtccttcc ctgggga.aa atgtctttct

            401  
  AB098115  GAGGAGC
  AF239964  GAGGAGC
  AB098116  GAGGAGC
    D63493         
 Consensus  gaggagc
Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890