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- State: published
Mugil cephalus – Alignment
1 80 NC_003182 AAAAACCACC GTTGTAACTC AACTACAGGA ACGTGTAATG ACCACCATCC GGAAAAACCA CCCCTTGTTC AAGGCTGCGA AP002930 AAAAACCACC GTTGTAACTC AACTACAGGA ACGTGTAATG ACCACCATCC GGAAAAACCA CCCCTTGTTC AAGGCTGCGA Z70776 CCA CCCCCTGTTC AAGGCTGCGA Consensus aaaaaccacc gttgtaactc aactacagga acgtgtaatg accaccatcc ggaaaaaCCA CCCCtTGTTC AAGGCTGCGA 81 160 NC_003182 ACTCCGCGCT AATTGACCTC CCAGCCCCAG CTAGCCTCTC TTCACTATGA AACTTTGGCT CACTCCTTGG GCTATGCTTA AP002930 ACTCCGCGCT AATTGACCTC CCAGCCCCAG CTAGCCTCTC TTCACTATGA AACTTTGGCT CACTCCTTGG GCTATGCTTA Z70776 ACTCCGCGCT AATTGACCTC CCAGCCCCAG CCAGCCTCTC TTCATTATGA AACTTTGGCT CACTCCTTGG ACTATGTTTA Consensus ACTCCGCGCT AATTGACCTC CCAGCCCCAG CtAGCCTCTC TTCAcTATGA AACTTTGGCT CACTCCTTGG gCTATGcTTA 161 240 NC_003182 ATTTCACAAA TTGCAACAGG CCTATTCCTT GCCATACACT ACGCCCCTGA AACCTCATCC GCCTTTGCCT CCGTAGCCCA AP002930 ATTTCACAAA TTGCAACAGG CCTATTCCTT GCCATACACT ACGCCCCTGA AACCTCATCC GCCTTTGCCT CCGTAGCCCA Z70776 ATCTCACAGA TTGCAACAGG CCTATTCCTT GCCATACACT ACGCCCCTGA AACCTCATCT GCCTTTGCCT CCGTAGCCCA Consensus ATtTCACAaA TTGCAACAGG CCTATTCCTT GCCATACACT ACGCCCCTGA AACCTCATCc GCCTTTGCCT CCGTAGCCCA 241 320 NC_003182 CATCTGCCGA GACGTAAACT ACGGCTGACT GATCCGCAAC ATACACGCTA ATGGTGCATC TTTTTTCTTT GTCTGCATTT AP002930 CATCTGCCGA GACGTAAACT ACGGCTGACT GATCCGCAAC ATACACGCTA ATGGTGCATC TTTTTTCTTT GTCTGCATTT Z70776 CATCTGCCGA GACGTAAACT ACGGCTGACT GATCCGCAAC ATACACGCTA ATGGCGCATC TTTTTTCTTT GTCTGCATCT Consensus CATCTGCCGA GACGTAAACT ACGGCTGACT GATCCGCAAC ATACACGCTA ATGGtGCATC TTTTTTCTTT GTCTGCATtT 321 400 NC_003182 ACATTCACAT CGGACGTGGC CTTTATTACG GCTCGTACCT ATACAAGGAA ACTTGAAACA TTGGAGTCGT CCTCCTCCTC AP002930 ACATTCACAT CGGACGTGGC CTTTATTACG GCTCGTACCT ATACAAGGAA ACTTGAAACA TTGGAGTCGT CCTCCTCCTC Z70776 ATATTCACAT CGGACGTGGC CTTTACTAC Consensus AcATTCACAT CGGACGTGGC CTTTAtTACg gctcgtacct atacaaggaa acttgaaaca ttggagtcgt cctcctcctc 401 465 NC_003182 CTAGTGATAA TAACCGCATT TGTTGGATAT GTCCTCCCCT GAGGACAAAT ATCCTTCTGA GGTGC AP002930 CTAGTGATAA TAACCGCATT TGTTGGATAT GTCCTCCCCT GAGGACAAAT ATCCTTCTGA GGTGC Z70776 Consensus ctagtgataa taaccgcatt tgttggatat gtcctcccct gaggacaaat atccttctga ggtgc
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890