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Mallotus villosus – Alignment
1 80 AB049022 ATGGCCAGCC TTCGGAAAAC CCACCCCCTC CTGAAAATTA CCAATGACGC CCTAGTTGAT CTCCCTGCAC CCTCCAACAT U60559 U60558 U05594 U60557 U60556 U60554 U60555 Consensus 81 160 AB049022 CTCCATCTGG TGAAACTTTG GTTCTCTTCT TGGGCTTTGC CTCATTATTC AGATTCTTAC AGGCCTATTT CTGGCCATAC U60559 TTG GTTCTCTTCT TGGGCTTTGC CTCATTATTC AGATTCTTAC AGGCCTATTT CTGGCCATAC U60558 TTG GTTCTCTTCT TGGGCTTTGC CTCATTATTC AGATTCTTAC AGGCCTATTT CTAGCCATAC U05594 TTG GTTCTCTTCT TGGGCTTTGC CTCATTATTC AGATTCTTAC AGGCCTATTT CTGGCCATAC U60557 TTG GCTCTCTTCT TGGGCTTTGC CTCATTATTC AAATTCTTAC GGGCCTATTT CTGGCCATAC U60556 TTG GCTCTCTTCT TGGGCTTTGC CTCATTATTC AAATTCTTAC GGGCCTATTT CTGGCCATAC U60554 TTG GCTCTCTTCT TGGGCTTTGC CTTATTATTC AAATTCTTAC GGGCCTATTT CTGGCCATAC U60555 TTG GCTCTCTTCT TGGGCTTTGC CTCATTATTC AGATTCTTAC AGGCCTATTT CTGGCCATGC Consensus TTG GcTCTCTTCT TGGGCTTTGC CTcATTATTC AgATTCTTAC aGGCCTATTT CTGGCCATaC 161 240 AB049022 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGC CGTGACGTAA ATTATGGCTG AATAATCCGA U60559 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGC CGTGACGTAA ATTATGGCTG AATAATCCGA U60558 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGC CGTGACGTAA ATTATGGCTG AATAATCCGA U05594 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTGGT ACACCTATGC CGTGACGTAA ATTATGGCTG AATAATTCGA U60557 ACTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGT CGTGACGTAA ATTATGGCTG ACTAATCCGG U60556 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGT CGTGACGTAA ATTATGGCTG ACTAATCCGG U60554 ATTACACTGC CGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGT CGTGACGTAA ATTATGGCTG ACTAATCCGG U60555 ATTACACTGC TGAGACTGCC ACAGCATTCT CCTCCGTAGT ACACCTATGC CGTGACGTAA ATTATGGGTG ACTAATCCGA Consensus AtTACACTGC cGAGACTGCC ACAGCATTCT CCTCCGTaGT ACACCTATGc CGTGACGTAA ATTATGGcTG AcTAATcCGa 241 320 AB049022 AACATGCATG CTAACGGAGC ATCCTTCTTC TTTATTTGTA TTTACCTCCA TATCGGCCGA GGGCTTTACT ACGGCTCTTT U60559 AACATGCATG CTAACGGAGC ATCCTTCTTC TTTATTTGTA TTTACCTCCA TATCGGCCGA GGGCTTTACT ACGGCTCTTT U60558 AACATGCATG CTAACGGAGC ATCCTTCTTC TTTATTTGTA TTTACCTCCA TATCGGCCGA GGGCTTTACT ACGGCTCTTT U05594 AACATGCATG CTAACGGAGC ATCCTTCTTC TTTATTTGTA TTTACCTCCA TATCGGCCGA GGGCTTTACT ACGGCTCTTT U60557 AACATGCATG CTAACGGAGC ATCTTTCTTC TTTATTTGCA TTTACCTTCA TATTGGCCGA GGCCTTTATT ACGGCTCTTT U60556 AACATGCATG CTAACGGAGC ATCTTTCTTC TTTATTTGCA TTTACCTTCA TATTGGCCGA GGCCTTTACT ACGGCTCTTT U60554 AACATGCATG CTAACGGAGC ATCTTTCTTC TTTATTTGCA TTTACCTTCA TATTGGCCGA GGCCTTTACT ACGGCTCTTT U60555 AACATGCATG CTAACGGAGC ATCTTTCTTC TTTATTTGCA TTTACCTCCA TATCGGCCGA GGCCTTTACT ATGGCTCTTT Consensus AACATGCATG CTAACGGAGC ATCtTTCTTC TTTATTTGcA TTTACCTcCA TATcGGCCGA GGcCTTTAcT AcGGCTCTTT 321 400 AB049022 CCTTTATAAA GAGACTTGAA CCGTCGGCGT GGTCCTTCTC CTGCTAGTTA TGATGACTGC CTTTGTAGGC TATGTACTCC U60559 CCTTTATAAA GAGACTTGAA CCGTCGGCGT GGTCCTTCTC CTGCTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U60558 CCTTTATAAA GAGACTTGAA CCGTCGGCGT GGTCCTTCTC CTGCTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U05594 CCTTTATAAA GAGACTTGAA CCGTCGGCGT GGTCCTTCTC CTGCTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U60557 CCTTTATAAA GAGACTTGAA ACGTCGGCGT AGTCCTTCTC CTACTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U60556 CCTTTATAAA GAGACTTGAA ACGTCGGCGT AGTCCTTCTC CTACTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U60554 CCTTTATAAA GAGACTTGAA ACGTCGGCGT AGTCCTTCTC CTACTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC U60555 CCTTTATAAA GAGACTTGAA ACGTCGGCGT AGTCCTTCTC CTACTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC Consensus CCTTTATAAA GAGACTTGAA aCGTCGGCGT aGTCCTTCTC CTaCTAGTTA TGATGACTGC CTTTGTAGGC TATGTCC 401 AB049022 CT U60559 U60558 U05594 U60557 U60556 U60554 U60555 Consensus
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890