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Merluccius merluccius – Alignment
1 80 AF120096 AF469623 ATGGCCAGCC TCCGAAAAAC TCATCCCCTT CTAAAGATTG CTAATGATGC ATTAGTAGAC CTTCCTGCCC CCTCTAACCT Consensus .......... .......... .......... .......... .......... .......... .......... .......... 81 160 AF120096 TTCG GGTCTCTCCT AGGCCTCTGC TTACCCGCCC AAATCTTATC AGGGCTATTT CTAGCGATAC AF469623 CTCAACATTA TGAAACTTCG GGTCTCTCCT AGGCCTCTGC TTAGCCGCCC AAATCTTAAC AGGGCTATTT CTAGCGATAC Consensus .......... ......TTCG GGTCTCTCCT AGGCCTCTGC TTAcCCGCCC AAATCTTAaC AGGGCTATTT CTAGCGATAC 161 240 AF120096 ATTATACCGC AAACGTCGAG ATACCTTTCT CATCCGTCGT ACACATCTGC CGCGACGTAA ATTACGGATG ACTAATCCGC AF469623 ATTATACCGC AAACGTCGAG ATAGCTTTCT CATCCGTCGT ACACATCTGC CGCGACGTAA ATTACGGATG ACTAATCCGC Consensus ATTATACCGC AAACGTCGAG ATAcCTTTCT CATCCGTCGT ACACATCTGC CGCGACGTAA ATTACGGATG ACTAATCCGC 241 320 AF120096 AACATACACG CCAACGGCGC TTCTTTCTTC TTCATCTGCC TCTACCTACA CATTGCACGA GGCCTATATT ACGGCTCCTA AF469623 AACATACACG CCAACGGCGC TTCTTTCTTC TTCATCTGCC TCTACCTACA CATTGCACGA GGCCTATATT ACGGCTCCTA Consensus AACATACACG CCAACGGCGC TTCTTTCTTC TTCATCTGCC TCTACCTACA CATTGCACGA GGCCTATATT ACGGCTCCTA 321 400 AF120096 CTTATTCATA GAGACCTGAA ACATTGGAGT TGTACTATTC CTTTTAGTAA TAATGACCGC CTTCGTAGGC TACGTCCTCC AF469623 CTTATTCATA GAGACCTGAA ACATTGGAGT TGTACTATTC CTTTTAGTAA TAATGACCGC CTTCGTAGGC TACGTCCTCC Consensus CTTATTCATA GAGACCTGAA ACATTGGAGT TGTACTATTC CTTTTAGTAA TAATGACCGC CTTCGTAGGC TACGTCCTCC 401 435 AF120096 CTTGAGGACA AATATCATTC TGAGGGGCTG ATTTT AF469623 C Consensus C......... .......... .......... .....
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890