Skip to content

FischDB - die Fischdatenbank

Personal tools
You are here: Home » Fischkatalog » Tetrapturus albidus » alignment
Views
  • State: published

Tetrapturus albidus – Alignment

 


            1                                                                                    80
  AY619699                         GCTATACAC TACACCTCGG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ACATCTGCCG
  AY319370   TCCTTACAG GCCTTTTCCT CGCTATACAC TACACCTCGG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ACATCTGCCG
    L11552   TCCTTACAG GCCTTTTCCT CGCTATACAC TACACCTCGG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ACATCTGCCG
    L11550   TCCTTACAG GCCTTTTCCT CGCTATACAC TACACCTCGG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ACATCTGCCG
  AY319369   TTCTTACAG GCCTTTTCCT CGCTATACAT TACACCTCAG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ATATCTGCCG
    L11551   TTCTTACAG GCCTTTTCCT CGCTATACAT TACACCTCAG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ATATCTGCCG
    L11553   TTCTTACAG GCCTTTTCCT CGCTATACAT TACACCTCAG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ATATCTGCCG
    L11555  CTTCTTACAG GCCTTTTCCT CGCTATACAT TACACCTCAG ACATCGCAAC AGCCTTCACA TCCGTAGCCC ATATCTGCCG
 Consensus   t.cttacag gccttttcct cGCTATACAc TACACCTCgG ACATCGCAAC AGCCTTCACA TCCGTAGCCC AcATCTGCCG

            81                                                                                  160
  AY619699  GAACGTGAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTA CATCTGCATT TACCTCCATA
  AY319370  GGACGTGAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATT TACCTCCATA
    L11552  GGACGTGAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATT TACCTCCATA
    L11550  GGACGTGAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATT TACCTCCATA
  AY319369  GGACGTAAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATC TACCTCCACA
    L11551  GGACGTAAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATC TACCTCCACA
    L11553  GGACGTAAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATC TACCTCCACA
    L11555  GGACGTAAAT TACGGCTGAC TCATTCGAAA CATACATGCC AACGGCGCAT CTTTCTTCTT CATCTGCATC TACCTCCACA
 Consensus  GgACGTgAAT TACGGCTGAC TCATTCGAAA TATACATGCC AACGGCGCAT CTTTCTTCTt CATCTGCATt TACCTCCAtA

            161                                                                                 240
  AY619699  TCGGTCGAGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTAGGTGTAG TCCTCCTACT TCTAGTCATG
  AY319370  TCGGTCGAGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTAGGTGTAG TCCTCCTACT TCTAGTCATG
    L11552  TCGGTCGAGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTAGGTGTAG TCCTCCTACT TCTAGTCATG
    L11550  TCGGTCGAGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTAGGTGTAG TCCTCCTACT TCTAGTCATG
  AY319369  TCGGTCGGGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTGGGTGTCG TCCTCCTACT CCTAGTCATG
    L11551  TCGGTCGGGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTGGGTGTCG TCCTCCTACT CCTAGTCATG
    L11553  TCGGTCGGGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTGGGTGTCG TCCTCCTACT CCTAGTCATG
    L11555  TCGGTCGGGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTGGGTGTCG TCCTCCTACT CCTAGTCATG
 Consensus  TCGGTCGaGG CCTCTACTAT GGCTCTTACC TGTATAAAGA GACATGAAAC GTaGGTGTaG TCCTCCTACT tCTAGTCATG

            241                                                       296
  AY619699  ATAACCGCCT TCGTCGGCTA CGTCCTCCCC TGAGGACAAA TGTCGTTCTG AGGTGC
  AY319370  ATAACCGCCT TCGTCGGCTA CGTCCTCCCC TGAGGACAAA TGTCGTTCTG AGGTGC
    L11552  ATAACCGCCT TCGTCGGCTA CGTCCTCCCC TGAGGACAAA TGTCGTTCTG AGGTGC
    L11550  ATAACCGCCT TCGTCGGCTA CGTCCTCCCC TGAGGACAAA TGTCCTTCTG AGGTGC
  AY319369  ATAACCGCCT TCGTCGGCTA CGTCCTTCCC TGAGGACAAA TATCCTTCTG AGGTGC
    L11551  ATAACCGCCT TCGTCGGCTA CGTCCTTCCC TGAGGACAAA TATCCTTCTG AGGTGC
    L11553  ATAACCGCCT TCGTCGGCTA CGTCCTTCCC TGAGGACAAA TATCCTTCTG AGGCGC
    L11555  ATAACCGCCT TCGTCGGCTA CGTCCTTCCC TGAGGACAAA TATCCTTCTG AGGTGC
 Consensus  ATAACCGCCT TCGTCGGCTA CGTCCTcCCC TGAGGACAAA TgTCgTTCTG AGGTGC

Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890