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- State: published
Lutjanus johnii – Alignment
1 80 AY651959 ATTGCTAACG ACGCTCTAGT TGACCTTCCC GCACCCTCCA ATATTTCAGC ATGATGAAAC TTTGGCTCCC TACTTGGCCT AY651958 ATTGCTAACG ACGCTCTAGT TGACCTYCCC GCACCCTCCA ATATTTCAGC ATGATGAAAC TTTGGCTCCC TACTTGGCCT AY651957 ATTGCTAACG ACGCTCTAGT TGACCTTCCC GCACCCTCCA ATATTTCAGT ATGATGAAAC TTTGGCTCCC TACTTGGCCT AY294197 ATTGCTAACG ACGCTCTAGT TGACCTTCCC GCACCCTCCA ATATTTCAGT ATGATGAAAC TTTGGCTCCC TACTTGGCCT AY294194 ATTGCTAACG ACGCTCTAGT TGACCTTCCC GCACCCTCCA ATATTTCAGT ATGATGAAAC TTTGGCTCCC TACTTGGCCT AY294196 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT AY294195 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT AY294189 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT AY294191 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT AY294192 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT AY294193 ATTGCTAACG ACGCACTAGT AGACCTCCCA GCGCCCTCTA ATATTTCAGT ATGATGAAAC TTTGGCTCTC TACTTGGCCT Consensus ATTGCTAACG ACGCtCTAGT tGACCT.CCc GCaCCCTCcA ATATTTCAGt ATGATGAAAC TTTGGCTCcC TACTTGGCCT 81 160 AY651959 TTGCTTAATC GCCCAAATTT TAACAGGACT TTTCCTCGCC ATACACTACA CCTCGGACAT CACAATGGCC TTCTCACTCG AY651958 TTGCTTAATT GCCCAGATTT TAACAGGACT TTTCCTCGCC ATACACTACA CCTCGGACAT CACAATGGCC TTCTCACTCG AY651957 TTGCTTAATT GCCCAAATTT TAACAGGACT TTTCCTCGCT ATACATTACA CCTCCGACAT CACAATAGCC TTCTCATCCG AY294197 TTGCTTAATT GCCCAAATTT TAACAGGACT TTTCCTCGCT ATACACTACA CCTCCGACAT CACAATGGCC TTCTCATCCG AY294194 TTGCTTAATT GCCCAAATTT TAACAGGACT TTTCCTCGCT ATACACTACA CCTCCGACAT CACAATGGCC TTCTCATCCG AY294196 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG AY294195 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG AY294189 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG AY294191 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG AY294192 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG AY294193 TTGCTTAATC GCCCAAATTC TAACAGGACT CTTCCTCGCA ATACATTATA CCTCAGATAT TACCATGGCC TTTTCATCCG Consensus TTGCTTAATc GCCCAaATTt TAACAGGACT tTTCCTCGC. ATACAtTAcA CCTC.GAcAT cACaATgGCC TTcTCAtcCG 161 240 AY651959 TTGCCCACAT CTGCCGCGAC GTAAACTACG GATGACTAAT CCGCAAACTA CACGCCAACG GCGCCTCTTT CTTCTTCATT AY651958 TTGCCCACAT CTGCCGCGAC GTAAACTACG GATGACTAAT CCGCAAACTA CACGCCAACG GCGCCTCTTT CTTCTTCATT AY651957 TTGCCCACAT CTGCCGAGAC GTAAATTACG GATGACTAAT CCGCAAGCTA CACGCCAACG GTGCCTCCTT CTTCTTCATC AY294197 TTGCCCACAT CTGCCGAGAC GTAAATTACG GATGACTAAT CCGCAACCTA CACGCCAACG GTGCCTCCTT CTTCTTCATC AY294194 TTGCCCACAT CTGCCGAGAC GTAAATTACG GATGACTAAT CCGCAACCTA CACGCCAACG GTGCCTCCTT CTTCTTCATC AY294196 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC AY294195 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC AY294189 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC AY294191 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC AY294192 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC AY294193 TCGCCCACAT CTGTCGAGAT GTAAACTACG GCTGACTAAT CCGAAACCTC CACGCCAACG GCGCCTCCTT CTTCTTCATC Consensus TtGCCCACAT CTGcCGaGAc GTAAAcTACG GaTGACTAAT CCGcAAcCTa CACGCCAACG GcGCCTCcTT CTTCTTCATc 241 320 AY651959 TGCATCTACC TTCACATCGG CCGAGGCCTT TACTATGGTT CTTACCTATA CAAAGAAACA TGAAACATCG GAGTTGTTCT AY651958 TGCATCTACC TTCACATCGG CCGAGGCCTT TACTATGGTT CTTACCTATA CAAAGAAACA TGAAACATCG GAGTTGTTCT AY651957 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTATGGTT CTTACCTCTA CAAAGAAACA TGAAACATTG GAGTTGTTCT AY294197 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTATGGTT CTTACCTCTA CAAAGAAACA TGAAACATTG GAGTTGTTCT AY294194 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTATGGTT CTTACCTCTA CAAAGAAACA TGAAACATTG GAGTTGTTCT AY294196 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT AY294195 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT AY294189 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT AY294191 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT AY294192 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT AY294193 TGCATCTACC TCCACATCGG CCGAGGCCTT TACTACGGCT CCTACCTCTA CAAAGAAACA TGAAATATTG GAGTCGTTCT Consensus TGCATCTACC TcCACATCGG CCGAGGCCTT TACTAtGGtT CtTACCTcTA CAAAGAAACA TGAAAcATtG GAGTtGTTCT 321 392 AY651959 CCTCCTTCTA GTAATAGCAA CTGCCTTCGT GGGCTACGTT CTTCCCTGAG GACAAATATC ATTCTGAGGG GC AY651958 CCTCCTTCTA GTAATAGCAA CTGCCTTCGT GGGCTACGTT CTTCCCTGAG GACAAATATC ATTCTGAGGG GC AY651957 CCTCCTCCTA GTAATAGCAA CTGCCTTCGT AGGCTACGTC CTTCCCTGAG GACAAATGTC ATTCTGAGGG GC AY294197 CCTCCTTCTA GTAATAGCAA CTGCCTTCGT AGGCTACGTC CTTCCCTGAG GACAAATGTC ATTCTGAGGG GC AY294194 CCTCCTCCTA GTAATAGCAA CTGCCTTCGT AGGCTACGTC CTTCCCTGAG GACAAATGTC ATTCTGAGGG GC AY294196 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC AY294195 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC AY294189 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC AY294191 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC AY294192 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC AY294193 ACTCCTCCTA GTTATGGCAA CCGCCTTCGT AGGCTACGTC CTGCCATGAG GACAAATATC TTTTTGAGGT GC Consensus cCTCCTcCTA GTaATaGCAA CtGCCTTCGT aGGCTACGTc CTtCCcTGAG GACAAATaTC aTTcTGAGGg GC
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890