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  • State: published

Acipenser nudiventris – Alignment

 


            1                                                                                    80
  AJ245832        CTAA TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC
  AF283731  TAAAAACCAA TGGCAAACAT CCGAAAAACA CACCCACTAC TTAAAATTAT TAATGGAGCA TTTATTGACC TCCCCACACC
  AF308920                                                                                         
  AF308921                                                                                         
  AF006152                                                                                         
 Consensus  .......... .......... .......... .......... .......... .......... .......... ..........

            81                                                                                  160
  AJ245832  CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC
  AF283731  CTCCAACATC TCCGTGTGAT GAAATTTTGG CTCACTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC
  AF308920                                       CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC
  AF308921                                       CTCCTA GGCCTCTGCC TTATCACACA AATCCTAACA GGACTATTTC
  AF006152                                       CTCCTA GGCCTCTGCC TTGTCACACA AATCCTAACA GGACTATTTC
 Consensus  .......... .......... .......... ....CTCCTA GGCCTCTGCC TTgTCACACA AATCCTAACA GGACTATTTC

            161                                                                                 240
  AJ245832  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGGTGA
  AF283731  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGGTGA
  AF308920  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGGTGA
  AF308921  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTGTCGCC CACATCTGCC GAGATGTAAA TTACGGGTGA
  AF006152  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTATTGCC CACATCTGCC GAGATGTAAA TTACGGGTGA
 Consensus  TTGCAATACA CTACACAGCT GACATTTCAA CAGCCTTCTC CTCTgTcGCC CACATCTGCC GAGATGTAAA TTACGGGTGA

            241                                                                                 320
  AJ245832  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA
  AF283731  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA
  AF308920  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA
  AF308921  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA
  AF006152  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA
 Consensus  CTAATCCGAA ATATTCATGC AAACGGGGCC TCCTTCTTCT TTATCTGCTT GTACCTCCAT GTAGCACGAG GCATGTACTA

            321                                                                                 400
  AJ245832  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTAGGAT
  AF283731  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATAACCGCC TTCGTAGGAT
  AF308920  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCTCACCAT AATA                 
  AF308921  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA ATCCTCCTGC TTCT                            
  AF006152  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA T                                          
 Consensus  CGGTTCATAC CTCCAAAAAG AAACCTGAAA CATCGGAGTA atcctcctgc ttct...... .......... ..........

            401                                  437
  AJ245832  ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC
  AF283731  ATGTACTGCC CTGAGGACAG ATATCATTTT GAGGGGC
  AF308920                                          
  AF308921                                          
  AF006152                                          
 Consensus  .......... .......... .......... .......

Referenz: Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890