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- State: published
Solea solea – Alignment
1 80 AB125327 A TGACTAGTCT ACGAAAATCC CACCCTTTAA TTAAAATCAT TAACAGCTCC GTTATTGATC AY164473 A TGACTAGTCT ACGAAAATCC CACCCTTTAA TTAAAATCAT TAACAGCTCC GTTATTGATC AF413810 TTATTCAACT ACAGGAACAA TGACTAGTCT ACGAAAATCC CACCCTTTAA TTAAAATCAT TAACAGCTCC GTTATTGATC AF113181 AF113184 AF113185 AF113186 AF113182 AF113183 AF113187 AF289717 AF289716 Consensus . .......... .......... .......... .......... .......... .......... 81 160 AB125327 TCCCAGCCCC TTCGAACATT TCTGCATGAT GAAACTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AY164473 TCCCAGCCCC TTCGAACATT TCTGCATGAT GAAACTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF413810 TCCCAGCCCC TTCGAACATT TCTGCATGAT GAAACTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113181 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113184 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113185 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113186 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113182 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113183 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF113187 CTTTGG CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF289717 CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA AF289716 CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA Consensus .......... .......... .......... ....ctttgg CTCCCTATTA GGCCTCTGCC TAATTACCCA AATTGTCACA 161 240 AB125327 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AY164473 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF413810 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113181 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113184 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113185 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113186 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113182 GGACTCTTAC TCGCAATGCA CTATACAGCG GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113183 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF113187 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA AF289717 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTA CACATCTGCC GGGACGTTAA AF289716 GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA Consensus GGACTCTTAC TCGCAATGCA CTATACAGCA GATGCCTCTA CCGCATTTTC CTCCGTCGTG CACATCTGCC GGGACGTTAA 241 320 AB125327 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AY164473 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF413810 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113181 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113184 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113185 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113186 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113182 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113183 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF113187 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF289717 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG AF289716 TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG Consensus TTATGGATGA TTAATCCGAA ATGTCCACGC CAACGGCGCA TCATTCTTCT TTATTTGCAT TTACCTTCAC ATCGGACGAG 321 400 AB125327 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AY164473 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF413810 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113181 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113184 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113185 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113186 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTGCTTA TACTAGTTAT AGCCACGGCC AF113182 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113183 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF113187 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAATTAT AGCCACGGCC AF289717 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC AF289716 GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC Consensus GACTTTACTA CGGATCATAT GTCAACAAAG AGACCTGAAA CATCGGAGTT ATCCTACTTA TACTAGTTAT AGCCACGGCC 401 447 AB125327 TTCGTAGGAT ACGTCCTCCC CTGAGGACAG ATATCCTTCT GAGGAGC AY164473 TTCGTAGGAT ACGTCCTCCC CTGAGGACAG ATATCCTTCT GAGGAGC AF413810 TTCGTAGGAT ACGTCCTCCC C AF113181 TTCGTAGGAT ACGTCCTCCC C AF113184 TTCGTAGGAT ACGTCCTCCC C AF113185 TTCGTAGGAT ACGTCCTCCC C AF113186 TTCGTAGGAT ACGTCCTCCC C AF113182 TTCGTAGGAT ACGTCCTCCC C AF113183 TTCGTGGGAT ACGTCCTCCC C AF113187 TTCGTAGGAT ACGTCCTCCC C AF289717 TTCGTAGGAT ACGTCCTCCC CT AF289716 TTCGTAGGAT ACGTCCTCCC CT Consensus TTCGTAGGAT ACGTCCTCCC C.
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890