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- State: published
Polyodon spathula – Alignment
1 80 AY510086 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC TAACATCCGA AAAACACACC CCCTTCTTAA AATTATTAAT AY442349 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC TAACATCCGA AAAACACACC CCCTTCTTAA AATTATTAAT NC_004419 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC TAACATCCGA AAAACACACC CCCTTCTTAA AATTATTAAT AP004353 AAAAACCACC GTTGTTAATT CAACTATAAA AACCAATGGC TAACATCCGA AAAACACACC CCCTTCTTAA AATTATTAAT AJ245841 CAATGGC TAACATCCGA AAAACACACC CCCTTCTTAA AATTATTAAT M64910 AF308916 AF308914 X95059 AF308913 AF308915 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 81 160 AY510086 GGAGCATTTA TTGATCTACC AGCACCCTCT AACATCTCCG TATGATGAAA TTCTGGCTCA CTCCTTGGCC TCTGCCTGAT AY442349 GGAGCATTTA TTGATCTACC AGCACCCTCT AACATCTCCG TATGATGAAA TTCTGGCTCA CTCCTTGGCC TCTGCCTGAT NC_004419 GGAGCATTTA TTGATCTTCC AGCACCCTCT AACATCTCCG TATGATGAAA TTCTGGCTCA CTCCTTGGCC TCTGCCTAAT AP004353 GGAGCATTTA TTGATCTTCC AGCACCCTCT AACATCTCCG TATGATGAAA TTCTGGCTCA CTCCTTGGCC TCTGCCTAAT AJ245841 GGAGCATTTA TTGATCTACC AGCACCCTCT AACATCTCCG TATGATGAAA TTCTGGCTCA CTCCTTGGCC TCTGCCTGAT M64910 TCTGGCTCA CTCCTTGGCC TCTGCCTAAT AF308916 CTCCTTGGCC TCTGCCTGAT AF308914 CTCCTTGGCC TCTGCCTAAT X95059 CTCCTTGGCC TCTGCCTAAT AF308913 CTCCTTGGCC TCTGCCTAAT AF308915 CTCCTTGGCC TCTGCCTGAT Consensus .......... .......... .......... .......... .......... .......... CTCCTTGGCC TCTGCCTaAT 161 240 AY510086 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AY442349 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC ATCGCCCACA NC_004419 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AP004353 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AJ245841 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC ATCGCCCACA M64910 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AF308916 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AF308914 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA X95059 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AF308913 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCC GTCGCCCACA AF308915 CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCT GTCGCCCACA Consensus CACACAGATT CTAACAGGAT TATTTCTCGC AATACACTAC ACAGCTGACA TCTCAACAGC CTTCTCCTCc GTCGCCCACA 241 320 AY510086 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AY442349 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC NC_004419 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AP004353 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AJ245841 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC M64910 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AF308916 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AF308914 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC X95059 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AF308913 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC AF308915 TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC Consensus TCTGTCGAGA TGTTAACTAC GGATGACTAA TTCGAAACAT TCATGCAAAC GGAGCCTCCT TTTTCTTCAT CTGCCTCTAC 321 400 AY510086 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AY442349 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT NC_004419 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AP004353 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AJ245841 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT M64910 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AF308916 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AF308914 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT X95059 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AF308913 CTTCACATAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT AF308915 CTTCACGTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT Consensus CTTCACgTAG CCCGAGGCAT ATACTATGGC TCATACCTCT ACAAAGAAAC CTGAAACATC GGAGTAGTTC TCCTACTCCT 401 463 AY510086 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCATGA GGACAGATAT CCTTCTGAGG GGC AY442349 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCATGA GGACAGATAT CCTTCTGAGG GGC NC_004419 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCATGA GGACAGATAT CCTTCTGAGG GGC AP004353 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCATGA GGACAGATAT CCTTCTGAGG GGC AJ245841 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCATGA GGACAGATAT CCTTCTGAGG GGC M64910 AACTATAATA ACCGCCTTCG TAGGATATGT GCTCCCA AF308916 AACTATAATA AF308914 AACTATAATA X95059 AACTATAATA AF308913 AACTATAATA AF308915 Consensus aactataata .......... .......... .......... .......... .......... ...
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890