Views
- State: published
Dicentrarchus labrax – Alignment
1 80 AF143190 ATGG CCGCCCTCCG TAAAACACAC CCCTTATTAA AAATCGCAAA AF165071 AAAAACCACC GTTGTTATTC AACTAAGGGA GCATTAATGG CCGCCCTCCG TAAAACACAC CCCTTATTAA AAATCGCAAA AF143189 ATGG CCGCCCTCCG TAAAACACAC CCCCTATTAA AAATCGCAAA X81566 ATGG CCGCCCTCCG TAAAACACAC CCCCTATTAA AAATCGCAAA Z30190 TTAATGG CCGCCCTCCG TAAAACACAC CCCCTATTAA AAATCGCAAA Consensus .......... .......... .......... ......ATGG CCGCCCTCCG TAAAACACAC CCCcTATTAA AAATCGCAAA 81 160 AF143190 TCATGCACTT GTTGATCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA AF165071 TCATGCACTT GTTGATCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA AF143189 TCATGCACTT GTTGACCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA X81566 TCATGCACTT GTTGACCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA Z30190 TCATGCACTT GTTGACCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA Consensus TCATGCACTT GTTGAcCTGC CGGCCCCTTC AAATATTTCA GTTTGATGAA ATTTCGGTTC GCTCTTAGGC CTATGCTTGA 161 240 AF143190 TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACCTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC AF165071 TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACCTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC AF143189 TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACTTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC X81566 TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACTTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC Z30190 TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACTTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC Consensus TTTCCCAAAT TCTTACAGGT CTATTTTTAG CTATACATTA TACtTCAGAT ATCGCAACAG CCTTCTCCTC CATCGCACAC 241 320 AF143190 ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATCCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA AF165071 ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATCCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA AF143189 ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATTCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA X81566 ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATTCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA Z30190 ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATTCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA Consensus ATTTGTCGAG ATGTTAACTA TGGCTGACTT ATtCGTAATC TTCACGCCAA TGGTGCATCT TTCTTCTTTA TTTGTATTTA 321 400 AF143190 TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT TGGGGTAATC CTTCTCCTCT AF165071 TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT TGGGGTAATC CTTCTCCTCT AF143189 TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT CGGGGTAATC CTTCTCCTCT X81566 TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT CGGGGTAATC CTTCTCCTCT Z30190 TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT CGGGGTAATC CTTCTCCTCT Consensus TCTTCACATT GGCCGAGGCC TGTACTACGG CTCATACCTG TATAAAGAAA CATGAAACAT cGGGGTAATC CTTCTCCTCT 401 464 AF143190 TAGTAATAAT GACAGCCTTC GTAGGCTATG TGCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC AF165071 TAGTAATAAT GACAGCCTTC GTAGGCTATG TGCTGCCCTG AGGACAAATA TCTTTTTGAG GCGC AF143189 TAGTAATAAT GACAGCCTTC GTAGGCTATG TGTTGCCCTG AGGACAAATA TCTTTTTGAG GCGC X81566 TAGTAATAAT GACAGCCTTC GTAGGCTATG TGTTGCCCTG AGGACAAATA TCTTTTTGAG GCGC Z30190 TAGTAATATT Consensus TAGTAATAaT gacagccttc gtaggctatg tg.tgccctg aggacaaata tctttttgag gcgc
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890