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- State: published
Scophthalmus rhombus – Alignment
1 80 AY164470 AACAGT GCTTTAGTAG AF413809 TTATTCAACT ACAAGAACCT TAATGACCAG CCTACGAAAG TCCCACCCCC TCCTAAAGAT CGCAAACAGT GCTTTAGTAG AF165084 AAGAACCT TAATGACCAG CCTACGAAAG TCCCACCCCC TCCTAAAGAT CGCAAACAGT GCTTTAGTAG Consensus .......... ..aagaacct taatgaccag cctacgaaag tcccaccccc tcctaaagat cgcaAACAGT GCTTTAGTAG 81 160 AY164470 ATCTCCCCGC TCCCTCTAAT ATTTCAGTTT GGTGAAACTT CGGCTCTCTT CTTGGCCTCT GCTTAGCCAC CCAACTCCTT AF413809 ATCTCCCCGC TCCCTCTAAT ATTTCAGTTT GGTGAAACTT CGGCTCTCTT CTTGGCCTCT GCTTAGCCAC CCAACTCCTT AF165084 ATCTCCCCGC TCCCTCTAAT ATTTCAGTTT GGTGAAACTT CGGCTCTCTT CTTGGCCTCT GCTTAGCCAC CCAACTCCTT Consensus ATCTCCCCGC TCCCTCTAAT ATTTCAGTTT GGTGAAACTT CGGCTCTCTT CTTGGCCTCT GCTTAGCCAC CCAACTCCTT 161 240 AY164470 ACCGGGCTTT TTTTAGCCAT GCACTATACT GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCACATTT GCCGAGATGT AF413809 ACCGGGCTTT TTTTAGCCAT GCACTATACT GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCACATTT GCCGAGATGT AF165084 ACCGGGCTTT TTTTAGCCAT GCACTATACT GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCACATTT GCCGAGATGT Consensus ACCGGGCTTT TTTTAGCCAT GCACTATACT GCGGATATCG CAACAGCCTT TACCTCCGTC GCCCACATTT GCCGAGATGT 241 320 AY164470 CAATTATGGT TGACTAATCC GAAACCTACA CGCCAACGGC GCATCTTTCT TCTTCCTCTG TATTTATATA CATATTGGCC AF413809 CAATTATGGT TGACTAATCC GAAACCTACA CGCCAACGGC GCATCTTTCT TCTTCCTCTG TATTTATATA CATATTGGCC AF165084 CAATTATGGT TGACTAATCC GAAACCTACA CGCCAACGGC CGATCTTTCT TCTTCCTCTG TATTTATATA CATATTGGCC Consensus CAATTATGGT TGACTAATCC GAAACCTACA CGCCAACGGC gcATCTTTCT TCTTCCTCTG TATTTATATA CATATTGGCC 321 400 AY164470 GAGGATTATA TAACGGATCC TACCTTTACA AGGAAACTTG AAGCGTGGGA GTTATTCTTC TTCTGCTTGT CATGGCCACC AF413809 GAGGATTATA TTACGGATCC TACCTTTACA AGGAAACTTG AAGCGTGGGA GTTATTCTTC TTCTGCTTGT CATGGCCACC AF165084 GAGGATTATA TTACGGATCC TACCTTTACA AGGAAACTTG AAGCGTGGGA GTTATTCTTC TTCTGCTTGT CATGGCCACC Consensus GAGGATTATA TtACGGATCC TACCTTTACA AGGAAACTTG AAGCGTGGGA GTTATTCTTC TTCTGCTTGT CATGGCCACC 401 450 AY164470 GCCTTCGTCG GCTATGTCCT CCCCTGAGGA CAAATGTCTT TCTGGGGAGC AF413809 GCCTTCGTCG GCTATGTCCT CCCC AF165084 GCCTTCGTCG GCTATGTCCT CCCCTGAGGA CAAATGTCTT TCTGGGGAGC Consensus GCCTTCGTCG GCTATGTCCT CCCCtgagga caaatgtctt tctggggagc
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890