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- State: published
Thunnus albacares – Alignment
1 80 AB098103 TAAAAATCGC TAACGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATC TCTGCATGAT GAAACTTTGG AB098101 TCGCCGCTAC TAAAAATCGC TAACGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATC TCTGCATGAT GAAACTTTGG AB098102 ACGACGCA CTAGTTGACC TTCCTACCCC CTCTAATATC TCTGCATGAT GAAACTTTGG L11557 Consensus .......... .......... ..acgacgca ctagttgacc ttcctacccc ctctaatatc tctgcatgat gaaactttgg 81 160 AB098103 CTCACTACTT GGCCTTTGCC TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT AB098101 CTCACTACTT GGCCTTTGCC TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT AB098102 CTCACTACTT GGCCTTTGCC TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT L11557 TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT Consensus ctcactactt ggcctttgcc TTATTTCTCA AATCCTTACA GGACTATTCC TCGCAATACA CTACACCCCT GATGTCGAAT 161 240 AB098103 CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC AB098101 CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC AB098102 CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC L11557 CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC Consensus CAGCCTTCGC CTCAGTAGCC CACATTTGCC GAGATGTCAA CTTCGGTTGA CTCATCCGGA ACCTCCACGC AAACGGGGCC 241 320 AB098103 TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAC CTATACAAGG AAACATGAAA AB098101 TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCCTAC CTATACAAGG AAACATGAAA AB098102 TCTTTCTTCT TTATCTGCAT CTACTTCCAC ATCGGCCGAG GACTTTACTA CGGCTCTTAC CTATACAAGG AAACATGAAA L11557 TCCTTCTTCT TCATCTGCAT CTACTTCCAC ATCGGCCGAG GCCTTTACTA CGGCTCTTAC CTATACAAGG AAACATGAAA Consensus TCtTTCTTCT TtATCTGCAT CTACTTCCAC ATCGGCCGAG GaCTTTACTA CGGCTCtTAC CTATACAAGG AAACATGAAA 321 400 AB098103 CATCGGAGTA GTACTCCTAC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGAGGACAA ATGTCTTTCT AB098101 CATCGGAGTA GTACTCCTAC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGAGGACAA ATGTCTTTCT AB098102 CATCGGAGTA GTACTCCTAC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTCCTTCC CTGAGGACAA ATGTCTTTCT L11557 CATCGGAGTA GTACTCCTAC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTTCTTCC CTGAGGACAA ATGTCTTTCT Consensus CATCGGAGTA GTACTCCTAC TCCTAGTTAT GATGACCGCC TTCGTTGGCT ACGTcCTTCC CTGAGGACAA ATGTCTTTCT 401 AB098103 GAGGAGC AB098101 GAGGAGC AB098102 GAGGAGC L11557 GAGGAGC Consensus GAGGAGC
Referenz:
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890