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Beryx decadactylus – Alignment
1 80 NC_004393 AAAAACCACC GTTATTTTTT AACTATAAGA ACCCTTAATG GCCAACCTCC GAAAAACCCA CCCCCTCCTA AAAATCGCAA AP004430 AAAAACCACC GTTATTTTTT AACTATAAGA ACCCTTAATG GCCAACCTCC GAAAAACCCA CCCCCTCCTA AAAATCGCAA AF515761 AF515760 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 81 160 NC_004393 ACGACGCACT AATTGACCTT CCCACCCCCT CCAATATCTC AACCATGTGA AACTTTGGAT CCCTCCTAGG CCTCTGCTTA AP004430 ACGACGCACT AATTGACCTT CCCACCCCCT CCAATATCTC AACCATGTGA AACTTTGGAT CCCTCCTAGG CCTCTGCTTA AF515761 AF515760 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 161 240 NC_004393 ATCAGCCAAA TTCTTACAGG ACTTTTCCTA GCCATACACT ATACCTCTGA CATCGCCACC GCCTTCTCAT CAGTAGCCCA AP004430 ATCAGCCAAA TTCTTACAGG ACTTTTCCTA GCCATACACT ATACCTCTGA CATCGCCACC GCCTTCTCAT CAGTAGCCCA AF515761 CCAAA TTCTTACAGG ACTTTTCCTA GCCATACACT ATACCTCTGA CATCGCCACC GCCTTCTCAT CAGTGGCCCA AF515760 SCAAA TTCTTACAGG ACTTTTCCTA GCCATACACT ATACCTCTGA CATCGCCACC GCCTTCTCAT CAGTAGCCCA Consensus .....cCAAA TTCTTACAGG ACTTTTCCTA GCCATACACT ATACCTCTGA CATCGCCACC GCCTTCTCAT CAGTaGCCCA 241 320 NC_004393 CATCTGCCGG GACGTAAACT ACGGATGACT GATCCGAAAC CTGCACGCCA ACGGAGCATC CGTCTTCTTC ATCTGCATTT AP004430 CATCTGCCGG GACGTAAACT ACGGATGACT GATCCGAAAC CTGCACGCCA ACGGAGCATC CGTCTTCTTC ATCTGCATTT AF515761 CATCTGCCGG GACGTAAACT ACGGATGACT GATCCGAAAC CTGCACGCCA ACGGAGCATC CGTCTTCTTC ATCTGCATTT AF515760 CATCTGCCGG GACGWAAACT ACGGATGACT GATCCGAAAC CTGCACGCCA ACGGAGCATC CGTCTTCTTC ATCTGCATTT Consensus CATCTGCCGG GACGtAAACT ACGGATGACT GATCCGAAAC CTGCACGCCA ACGGAGCATC CGTCTTCTTC ATCTGCATTT 321 400 NC_004393 ACATGCACAT CGGCCGAGGA CTATACTACG GCTCCTACCT CTATAAAGAA ACCTGAAACA CCGGAGTAGT TCTACTCCTG AP004430 ACATGCACAT CGGCCGAGGA CTATACTACG GCTCCTACCT CTATAAAGAA ACCTGAAACA CCGGAGTAGT TCTACTCCTG AF515761 ACATGCACAT CGGCCGAGGA CTATACTACG GCTCCTACCT CTATAAAGAA ACCTGAAACA CCGGAGTAGT TCTACTCCTG AF515760 ACATGCACAT CGGCCGAGGA CTATACTACG GCTCCTACCT CTATAAAGAA ACCTGAAACA CCGGAGTAGT TCTACTCCTG Consensus ACATGCACAT CGGCCGAGGA CTATACTACG GCTCCTACCT CTATAAAGAA ACCTGAAACA CCGGAGTAGT TCTACTCCTG 401 465 NC_004393 CTAGTAATAA TAACCGCTTT CGTAGGCTAT GTTCTTCCAT GAGGACAAAT ATCCTTCTGG GGTGC AP004430 CTAGTAATAA TAACCGCTTT CGTAGGCTAT GTTCTTCCAT GAGGACAAAT ATCCTTCTGG GGTGC AF515761 CTAGTAATAA TAACCGCTTT CGTAGGCTAT GTTCTTCC AF515760 CTAGTAATAA TAACCGCTTT CGTAGGCTAT GTTCTTCC Consensus CTAGTAATAA TAACCGCTTT CGTAGGCTAT GTTCTTCC.. .......... .......... .....
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890