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- State: published
Alburnus alburnus – Alignment
1 80 AY026393 ATGGCAAGCC TACGAAAAAC CCACCCACTA ATAAAAATCG CTAATGACGC GCTAGTCGAT CTTCCAACAC CATCTAACAT AF090744 ATGGCAAGCC TACGAAAAAC CCACCCACTA ATAAAAATCG CTAATGACGC GCTAGTCGAT CTTCCAACAC CATCTAACAT AF090743 ATGGCAAGCC TACGAAAAAC CCACCCACTG ATAAAAATCG CTAATGACGC GCTAGTCGAT CTTCCAACAC CATCTAACAT Y10443 ATGGCAAGCC TACGAAAAAC CCACCCACTA ATAAAAATCG CTAATGACGC GCTAGTCGAT CTTCCAACAC CATCTAACAT AF090745 ATGGCAAGCC TACGAAAAAC CCACCCACTA ATAAAAATCG CTAATGACGC GCTAGTCGAT CTTCCAACAC CATCTAACAT AJ388428 Y09470 Consensus .......... .......... .......... .......... .......... .......... .......... .......... 81 160 AY026393 TTCAGCAATG TGAAATTTCG GATCCCTTCT AGGGTTGTGT TTAATTACCC AAATCCTGAC AGGGTTATTC CTAGCCATAC AF090744 TTCAGCAATG TGAAATTTCG GATCCCTTCT AGGGTTGTGT TTAATTACCC AAATCCTAAC AGGGTTATTC CTAGCCATAC AF090743 TTCAGCAATG TGAAATTTCG GATCCCTTCT AGGGTTGTGT TTAATTACCC AAATCCTAAC AGGCTTATTC CTAGCCATAC Y10443 TTCAGCAATA TGAAATTTCG GATCCCTTCT AGGGTTATGT TTAATTACCC AAATCCTAAC AGGGTTATTC CTAGCCATAC AF090745 TTCAGCAATA TGAAATTTCG GATCTCTTCT AGGGTTATGT TTAATTACCC AAATCCTAAC AGGGCTATTC CTAGCCATAC AJ388428 AATTTCG GATCCCTTCT AGGGTTATTT TTAATTACCC AAATCCTAAC AGGGTTATTC CTACCCATAC Y09470 CTTCT AGGGTTATGT TTAATTACCC AAATCCTAAC AGGGTTATTC CTAGCCATAC Consensus .......... ...aatttcg gatccCTTCT AGGGTTaTgT TTAATTACCC AAATCCTAAC AGGGtTATTC CTAgCCATAC 161 240 AY026393 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTTGC CGAGACGTTA ACTACGGCTG GCTCATTCGA AF090744 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTTGC CGAGACGTTA ACTACGGCTG GCTCATTCGA AF090743 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTTGC CGAGACGTTA ACTACGGCTG GCTCATTCGA Y10443 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTTGC CGGGACGTTA ACTACGGCTG GCTCATTCGA AF090745 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTTGC CGAGACGTTA ACTACGGCTG GCTCATTCGA AJ388428 ACTACACCTC CAATATCTCA ACCGCATTCT CATCATTCAC CCATATTTGC CGGGACTTTA ACTACGGCTG GCTCATTCAA Y09470 ACTACACCTC CGATATCTCA ACCGCATTCT CATCAGTCAC CCATATTGGC CGGGACGTTA ACTACGGTTG GCTCATCCGA Consensus ACTACACCTC CgATATCTCA ACCGCATTCT CATCAgTCAC CCATATTtGC CGgGACgTTA ACTACGGcTG GCTCATtCgA 241 320 AY026393 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TATATATGCA TATCGCACGA GGTCTATATT ACGGCTCATA AF090744 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TATATATGCA TATCGCACGA GGTCTATATT ACGGCTCATA AF090743 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TATATATGCA TATCGCACGA GGTCTATATT ACGGCTCATA Y10443 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TATATATGCA TATCGCACGA GGTCTATATT ACGGCTCATA AF090745 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TGTATATGCA TATCGCACGG GGTCTATATT ACGGCTCATA AJ388428 AACCTACATG CCAACGGAGC ATCCTTCTTC TTCATCTGCC TATATATGCA TATCGCACAA GGTCTATATT ACGGCTCATA Y09470 AACCTACATG CCAACGGAGC ATCCTTCTCC TTCATCTGCC TATATATGCA TATCGCACGA GGTCTATATT ACGGTTCATA Consensus AACCTACATG CCAACGGAGC ATCCTTCTtC TTCATCTGCC TaTATATGCA TATCGCACga GGTCTATATT ACGGcTCATA 321 400 AY026393 TCTTTATAAA GAGACCTGAA ACATTGGGGT AGTACTATTT CTTCTGGTTA TGATAACAGC CTTCGTGGGC TATGTACTCC AF090744 TCTTTATAAA GAGACCTGAA ACATTGGGGT AGTACTATTT CTTCTGGTTA TGATAACAGC CTTCGTGGGC TATGTACTCC AF090743 CCTTTATAAA GAGACCTGAA ACATTGGGGT AGTACTATTT CTTCTGGTTA TGATAACAGC CTTCGTGGGC TATGTACTCC Y10443 TCTTTATAAA GAGACCTGAA ACATTGGGGT AGTACTATTT CTTCTGGTTA TGATAACAGC CTTCGTGGGC TATGTACTCC AF090745 TCTTTATAAA GAGACCTGAA ACATTGGGGT AGTACTATTT CTTCTGGTTA TGATAACAGC CTTCGTGGGC TATGTGCTCC AJ388428 TCTTTATAAA AAAACCTGAA ACATTGGGGT ATTACTATTT CTTCTGGTTA TAATAACAGC CTTCGTGGGC TATTTACTCC Y09470 TCTTTATAAA GAGACCTGAA ACATGGGGGT AGCACTATTT CTTCTGGTAA TGATAACAGC CTTCGGGGGC TATGTACTCC Consensus TCTTTATAAA gAgACCTGAA ACATtGGGGT AgtACTATTT CTTCTGGTtA TgATAACAGC CTTCGtGGGC TATgTaCTCC 401 428 AY026393 CATGAGGACA AATATCCTTT TGAGGTGC AF090744 CATGAGGACA AATATCCTTT TGAGGCGC AF090743 CATGAGGACA AATATCCTTT TGAGGCGC Y10443 CATGGGGACA AATATCCTTT TGAGGCGC AF090745 CATGAGGACA AATATCCTTT TGAGGTGC AJ388428 CATAAGGACA AATATCATTC TGA Y09470 CATGA Consensus CATgAggaca aatatc.tt. tga.....
Referenz:
Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890